RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 APOBEC2Q9Y235 224 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 SNX11Q9Y5W9 270 aa9.8□□□□□ -0.84
CHD7-208ENST00000528280 SMG1Q96Q15 3661 aaKnown RBP9.8□□□□□ -0.84
CHD7-208ENST00000528280 BPTFQ12830 3046 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 MUC22E2RYF6 1773 aaPredicted RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 FAM170AA1A519 330 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 TMEM191CA6NGB0 347 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 WASH4PA8MWX3 477 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 C10orf142B7Z368 130 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 TLR4O00206 839 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 GIPC1O14908 333 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 CCP110O43303 1012 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 CTSKP43235 329 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 GRK6P43250 576 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ARRB1P49407 418 aaPredicted RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 DNA2P51530 1060 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 RPL7AP62424 266 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 ZBED6P86452 979 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 GSE1Q14687 1217 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 PARP15Q460N3 678 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ARSIQ5FYB1 569 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ARTNQ5T4W7 220 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ERMARDQ5T6L9 678 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 NAPEPLDQ6IQ20 393 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 C22orf39Q6P5X5 142 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 FBXL19Q6PCT2 694 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 LINGO4Q6UY18 593 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ERN2Q76MJ5 926 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 ZNF571Q7Z3V5 609 aaPredicted RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 TMC6Q7Z403 805 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 DCP2Q8IU60 420 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 RTL3Q8N8U3 475 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ZCCHC14Q8WYQ9 949 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 ORAI3Q9BRQ5 295 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 SYT11Q9BT88 431 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 OSBPL1AQ9BXW6 950 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 GDF3Q9NR23 364 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 HECAQ9UBI9 543 aaPredicted RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 SERGEFQ9UGK8 458 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 DNAI1Q9UI46 699 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 SARDHQ9UL12 918 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 CAPN11Q9UMQ6 739 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 LUC7L2Q9Y383 392 aaKnown RBP9.79□□□□□ -0.84
CHD7-208ENST00000528280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHD7-208ENST00000528280 PCNX2A6NKB5 2137 aa9.79□□□□□ -0.84
CHD7-208ENST00000528280 TMCO5BA8MYB1 307 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 K7ERQ8 282 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 DAPK3O43293 454 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 SMAD6O43541 496 aaKnown RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 BUB1O43683 1085 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 CREB3O43889 395 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 PRPSAP2O60256 369 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 GJB6O95452 261 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 GSRP00390 522 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 SERPING1P05155 500 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 CDK4P11802 303 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 SPINK2P20155 84 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 PSMA2P25787 234 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ITGB7P26010 798 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 HCAR3P49019 387 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 CCT8P50990 548 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 SUOXP51687 545 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 NDST2P52849 883 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 RPS21P63220 83 aaKnown RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 ARF5P84085 180 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 BNC1Q01954 994 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 FOXC1Q12948 553 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 GRM3Q14832 879 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 MYLK3Q32MK0 819 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 BOLA3Q53S33 107 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 AGBL4Q5VU57 503 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 DPY19L3Q6ZPD9 716 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 LUZP1Q86V48 1076 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ZNF354CQ86Y25 554 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 UMODL1-AS1Q8N2C9 162 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 RYBPQ8N488 228 aaPredicted RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 CCDC185Q8N715 623 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 OR2I1PQ8NGU4 316 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 HCAR2Q8TDS4 363 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ARHGEF26Q96DR7 871 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ELF4Q99607 663 aaPredicted RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD7-208ENST00000528280 TTYH3Q9C0H2 523 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ISCUQ9H1K1 167 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 TNKS2Q9H2K2 1166 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 CNOT8Q9UFF9 292 aaKnown RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 PCOLCE2Q9UKZ9 415 aa9.78□□□□□ -0.84
CHD7-208ENST00000528280 ASCC3Q8N3C0 2202 aaKnown RBP9.78□□□□□ -0.84
CHD7-208ENST00000528280 DOCK4Q8N1I0 1966 aa9.77□□□□□ -0.84
CHD7-208ENST00000528280 SHROOM3Q8TF72 1996 aa9.77□□□□□ -0.84
CHD7-208ENST00000528280 PCDH15Q96QU1 1955 aa9.77□□□□□ -0.84
CHD7-208ENST00000528280 CACNA1EQ15878 2313 aa9.77□□□□□ -0.85
CHD7-208ENST00000528280 A0A1B0GTQ1 180 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms