RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 GLDCP23378 1020 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ITGB7P26010 798 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 L1CAMP32004 1257 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 RFC1P35251 1148 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 DEKP35659 375 aaKnown RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 NEK3P51956 506 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 HDAC4P56524 1084 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ARF5P84085 180 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 IL9RQ01113 521 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 NCAPHQ15003 741 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 POLD3Q15054 466 aaPredicted RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ZNF284Q2VY69 593 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 POM121L1PQ3SYA9 428 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 PRAMEF14Q5SWL7 426 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 KIAA1161Q6NSJ0 714 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 WDR59Q6PJI9 974 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 SLFN11Q7Z7L1 901 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 TMPRSS12Q86WS5 348 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 PROSER1Q86XN7 944 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 DRC7Q8IY82 874 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 CHST14Q8NCH0 376 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 CASKIN2Q8WXE0 1202 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ARHGEF2Q92974 986 aaKnown RBP14.47□□□□□ -0.09
CAPN1-212ENST00000527887 RAB7BQ96AH8 199 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 ARRDC3Q96B67 414 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 VCPIP1Q96JH7 1222 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 FEM1CQ96JP0 617 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 AGPAT1Q99943 283 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 TNKS2Q9H2K2 1166 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 KLHL11Q9NVR0 708 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 DKK4Q9UBT3 224 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 HS3ST3A1Q9Y663 406 aa14.47□□□□□ -0.09
CAPN1-212ENST00000527887 SPEGQ15772 3267 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 GOLGA8CPA6NN73 597 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 SMTNL1A8MU46 457 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 LRIG2O94898 1065 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 HTR7P34969 479 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 ZNF143P52747 638 aaPredicted RBP14.46□□□□□ -0.09
CAPN1-212ENST00000527887 RPS21P63220 83 aaKnown RBP14.46□□□□□ -0.09
CAPN1-212ENST00000527887 IQCB1Q15051 598 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 SFMBT2Q5VUG0 894 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 DNAJC24Q6P3W2 148 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 FBXL19Q6PCT2 694 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 MON1BQ7L1V2 547 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 APTXQ7Z2E3 356 aaKnown RBP14.46□□□□□ -0.09
CAPN1-212ENST00000527887 GATAD2AQ86YP4 633 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 CNDP2Q96KP4 475 aaKnown RBP14.46□□□□□ -0.09
CAPN1-212ENST00000527887 OSBPL1AQ9BXW6 950 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 CBX8Q9HC52 389 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 WASF2Q9Y6W5 498 aa14.46□□□□□ -0.09
CAPN1-212ENST00000527887 FAM170AA1A519 330 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 SLC31A1O15431 190 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 KDELR3O43731 214 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 PCDH8O95206 1070 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 POP4O95707 220 aaKnown RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 CD160O95971 181 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 GSRP00390 522 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 THEGLP0DJG4 465 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 ADRB3P13945 408 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 ACVRL1P37023 503 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 DNA2P51530 1060 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 CCNHP51946 323 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 YBEYP58557 167 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 SNRPD1P62314 119 aaKnown RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 BNIP3Q12983 259 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 TMEM259Q4ZIN3 620 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 INO80DQ53TQ3 878 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 EFHC2Q5JST6 749 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 ACAD10Q6JQN1 1059 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 PHLDB2Q86SQ0 1253 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 EID2Q8N6I1 236 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 PDCD7Q8N8D1 485 aaKnown RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 GRIN3AQ8TCU5 1115 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 ASB12Q8WXK4 309 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 TSC1Q92574 1164 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 ARHGEF26Q96DR7 871 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 CNPY3Q9BT09 278 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 CATSPERBQ9H7T0 1116 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 SEPT11Q9NVA2 429 aaKnown RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 HECAQ9UBI9 543 aaPredicted RBP14.45□□□□□ -0.1
CAPN1-212ENST00000527887 DNAI1Q9UI46 699 aa14.45□□□□□ -0.1
CAPN1-212ENST00000527887 PKD1L2Q7Z442 2459 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 TCRBV5S1A1TA0A578 114 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 WASH4PA8MWX3 477 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 EIF3CLB5ME19 914 aaKnown RBP14.44□□□□□ -0.1
CAPN1-212ENST00000527887 FAM72CH0Y354 149 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 TSPAN6O43657 245 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 RFPL3O75679 317 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 CKMT2P17540 419 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 EPHB2P29323 1055 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 RAD51Q06609 339 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 FILIP1LQ4L180 1135 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 HS1BP3Q53T59 392 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 ZNF805Q5CZA5 627 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 PPP1R15BQ5SWA1 713 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 FAM72AQ5TYM5 149 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 FAM72DQ6L9T8 149 aa14.44□□□□□ -0.1
CAPN1-212ENST00000527887 DCUN1D2Q6PH85 259 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms