RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 MYBL1P10243 752 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 PDGFRAP16234 1089 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 MAGEA1P43355 309 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 ZNF143P52747 638 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 HDAC4P56524 1084 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 GSDMDP57764 484 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 COG7P83436 770 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 NNTQ13423 1086 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 CAMK2GQ13555 558 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 ZNF234Q14588 700 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 EIF4HQ15056 248 aaKnown RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 CDCP2Q5VXM1 449 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 NADSYN1Q6IA69 706 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 PPP1R2P3Q6NXS1 205 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 TPGS1Q6ZTW0 290 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 KANSL1Q7Z3B3 1105 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 FAM217AQ8IXS0 508 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 ACRBPQ8NEB7 543 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 RNF139Q8WU17 664 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 BTBD6Q96KE9 485 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 CDK5RAP1Q96SZ6 601 aaKnown RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 SEMA3CQ99985 751 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 SGK2Q9HBY8 427 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 MYO1AQ9UBC5 1043 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 AGO1Q9UL18 857 aaKnown RBP11.22□□□□□ -0.61
NEDD8-204ENST00000526430 INTUQ9ULD6 942 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 TLR6Q9Y2C9 796 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 PCDHA13Q9Y5I0 950 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 DUSP10Q9Y6W6 482 aa11.22□□□□□ -0.61
NEDD8-204ENST00000526430 FBN2P35556 2912 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 A0A1W2PPC4 97 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PJA2O43164 708 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 CCP110O43303 1012 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 MTA2O94776 668 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 FSBPO95073 299 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PENKP01210 267 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 IGHV4-34P06331 123 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 EPHX1P07099 455 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 HMBSP08397 361 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 IRF1P10914 325 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 SFTPCP11686 197 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 TCF4P15884 667 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ITGB6P18564 788 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 GPD1P21695 349 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PRKCHP24723 683 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 SLC6A4P31645 630 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 RXRGP48443 463 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 TBX4P57082 545 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ATP11AP98196 1134 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 GEN1Q17RS7 908 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PROX2Q3B8N5 592 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ARL13BQ3SXY8 428 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 FAM133BQ5BKY9 247 aaKnown RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PRAMEF14Q5SWL7 426 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 DNAJC24Q6P3W2 148 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 RSRC2Q7L4I2 434 aaKnown RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 CACUL1Q86Y37 369 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ZNF683Q8IZ20 524 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 OXR1Q8N573 874 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 MSANTD4Q8NCY6 345 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 SLC35G2Q8TBE7 412 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 FNIP1Q8TF40 1166 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 AZIN2Q96A70 460 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PLD4Q96BZ4 506 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ZNF830Q96NB3 372 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PSMG3-AS1Q96PY0 264 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 PRMT1Q99873 361 aaKnown RBP11.21□□□□□ -0.61
NEDD8-204ENST00000526430 DESI2Q9BSY9 194 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 SELENOOQ9BVL4 669 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 NUP85Q9BW27 656 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 DEF6Q9H4E7 631 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ERVMER34-1Q9H9K5 563 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 GDF3Q9NR23 364 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ARHGEF38Q9NXL2 777 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 ADGRG1Q9Y653 693 aa11.21□□□□□ -0.61
NEDD8-204ENST00000526430 LRBAP50851 2863 aa11.21□□□□□ -0.62
NEDD8-204ENST00000526430 RP1P56715 2156 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 LRRK1Q38SD2 2015 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SCN8AQ9UQD0 1980 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 WNT1P04628 370 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 ITGB2P05107 769 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 CORO1AP31146 461 aaKnown RBP11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SULT1E1P49888 294 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 LINC00303Q3SY05 128 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 KIAA0895LQ68EN5 471 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 STRADAQ7RTN6 431 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 TADA2BQ86TJ2 420 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 DENND1CQ8IV53 801 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 GOLGA1Q92805 767 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SLC6A18Q96N87 628 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 SERPINB11Q96P15 392 aa11.2□□□□□ -0.62
NEDD8-204ENST00000526430 PEBP4Q96S96 227 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms