RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 TFCP2L1Q9NZI6 479 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 TBC1D29Q9UFV1 150 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 GTF3C4Q9UKN8 822 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 HSF4Q9ULV5 492 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 ARHGAP26Q9UNA1 814 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 B3GNT3Q9Y2A9 372 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 ENTPD2Q9Y5L3 495 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 SETBP1Q9Y6X0 1596 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 LRRC7Q96NW7 1537 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 KIF1BO60333 1816 aa5.06□□□□□ -1.6
CD44-220ENST00000525688 PIK3R4Q99570 1358 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 DIP2AQ14689 1571 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 NWD1Q149M9 1564 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 PLOD2O00469 737 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 MPHOSPH10O00566 681 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 PRYO14603 147 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 GUCY1B2O75343 617 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 TULP3O75386 442 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SGPL1O95470 568 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SLC4A1P02730 911 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 ADRB2P07550 413 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 P4HA1P13674 534 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 ACTN2P35609 894 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 ANP32AP39687 249 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 STAT6P42226 847 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SSR1P43307 286 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 RARRES1P49788 294 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 CYP4F2P78329 520 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 CUL4AQ13619 759 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 BECN1Q14457 450 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 CNGA3Q16281 694 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 GPR162Q16538 588 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 PRICKLE4Q2TBC4 344 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SETMARQ53H47 684 aaPredicted RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 HAUS3Q68CZ6 603 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 CNSTQ6PJW8 725 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 NLRP14Q86W24 1093 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 GALNT4Q8N4A0 578 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 ENDOVQ8N8Q3 282 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 ADPRHL1Q8NDY3 354 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 MAFAQ8NHW3 353 aaPredicted RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 ADAMTS15Q8TE58 950 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 TBC1D22AQ8WUA7 517 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 STAMQ92783 540 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 RNF125Q96EQ8 232 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 ZNF845Q96IR2 970 aaPredicted RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 ADGRE3Q9BY15 652 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 TRIM6Q9C030 488 aaPredicted RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 VPS33BQ9H267 617 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 RANBP17Q9H2T7 1088 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 TOR3AQ9H497 397 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 STN1Q9H668 368 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 ACAD9Q9H845 621 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SFXN1Q9H9B4 322 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 GRPEL1Q9HAV7 217 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 IL21RQ9HBE5 538 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 XAB2Q9HCS7 855 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 CNOT7Q9UIV1 285 aaKnown RBP5.05□□□□□ -1.6
CD44-220ENST00000525688 VPS28Q9UK41 221 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 AGTPBP1Q9UPW5 1226 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 NRXN3Q9Y4C0 1643 aa5.05□□□□□ -1.6
CD44-220ENST00000525688 SPATA31A5Q5VU36 1347 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 SPATA31A6Q5VVP1 1343 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 SPATA31A7Q8IWB4 1347 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 PI4KAP2A4QPH2 592 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 FAM90A7PA6NKC0 464 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 FAM90A22PA8MWA6 464 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 FAM90A12PA8MX19 464 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 FAM90A23PA8MXZ1 464 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 BTBD19C9JJ37 291 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 H7C1Q1 480 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 CLIC1O00299 241 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 PES1O00541 588 aaKnown RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 PEX12O00623 359 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 FYB1O15117 783 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 ZNF202O95125 648 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 TGDSO95455 350 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 METTL18O95568 372 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 NDUFS1P28331 727 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 ABCD1P33897 745 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 HOXD13P35453 343 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 CCT4P50991 539 aaKnown RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 ZNF84P51523 738 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 MVDP53602 400 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 CSE1LP55060 971 aaKnown RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 SOX10P56693 466 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 SLC37A1P57057 533 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 SIM1P81133 766 aaPredicted RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 HMGN5P82970 282 aaKnown RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 GALNT2Q10471 571 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 TMED1Q13445 227 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 MFSD13AQ14CX5 517 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 LARS2Q15031 903 aaKnown RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 GPR68Q15743 365 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 C5orf22Q49AR2 442 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 ZNF362Q5T0B9 420 aaPredicted RBP5.04□□□□□ -1.6
CD44-220ENST00000525688 CEP85Q6P2H3 762 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 Q6ZPA2 131 aa5.04□□□□□ -1.6
CD44-220ENST00000525688 SLC29A4Q7RTT9 530 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms