RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 CA4P22748 312 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 KDELR1P24390 212 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NFKBIAP25963 317 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ITGB7P26010 798 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SERPINA4P29622 427 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NUDT1P36639 197 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCNHP51946 323 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NEK3P51956 506 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATXN3P54252 364 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF33AQ06730 810 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SPEM2Q0P670 501 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 MMRN1Q13201 1228 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 LBRQ14739 615 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TEAD4Q15561 434 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CSRP2Q16527 193 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 POM121L1PQ3SYA9 428 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 AASDHQ4L235 1098 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC45A4Q5BKX6 768 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ANKRD20A8PQ5CZ79 823 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARSIQ5FYB1 569 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 AFMIDQ63HM1 303 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TXNRD3NBQ6F5E7 133 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FBXL19Q6PCT2 694 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 DPY19L3Q6ZPD9 716 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 BZW1Q7L1Q6 419 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 PEX26Q7Z412 305 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZSCAN30Q86W11 494 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 RFX6Q8HWS3 928 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SYT12Q8IV01 421 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 DEFB119Q8N690 84 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NPWQ8N729 165 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 UBL4BQ8N7F7 174 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCNYQ8ND76 341 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TMIEQ8NEW7 156 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR2A12Q8NGT7 310 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR2T34Q8NGX1 318 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 OR14C36Q8NHC7 312 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TPCN2Q8NHX9 752 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 CEP76Q8TAP6 659 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAM71BQ8TC56 605 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 KIAA1524Q8TCG1 905 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TSC1Q92574 1164 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 PIGKQ92643 395 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SKA1Q96BD8 255 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ALS2CR12Q96Q35 445 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 TUBGCP5Q96RT8 1024 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 FERMT1Q9BQL6 677 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 DESI2Q9BSY9 194 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NUSAP1Q9BXS6 441 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 SLC39A8Q9C0K1 460 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 MIR1-1HGQ9H1L0 117 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARRDC1-AS1Q9H2J1 176 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 KDM4CQ9H3R0 1056 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 NOL6Q9H6R4 1146 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ATP13A3Q9H7F0 1226 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 WSB2Q9NYS7 404 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 IPO11Q9UI26 975 aaKnown RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 MBD1Q9UIS9 605 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 PPM1HQ9ULR3 514 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 HYOU1Q9Y4L1 999 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 ALG6Q9Y672 507 aa5.49□□□□□ -1.53
HMGB1P40-201ENST00000525121 MUC6Q6W4X9 2439 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MUC22E2RYF6 1773 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3DA0A087WVF3 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3IA0A087WXS9 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3EA0A087X179 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3KA0A087X1G2 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 A0A1W2PQ67 120 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3FA6NER0 549 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 METTL12A8MUP2 240 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MIF4GDA9UHW6 222 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3LB9A6J9 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 J3KR12 359 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PJA2O43164 708 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MFSD11O43934 449 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 LEFTY1O75610 366 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ZNF189O75820 626 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PCDH8O95206 1070 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 UGT2B4P06133 528 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SYPP08247 313 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CD48P09326 243 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TBC1D3HP0C7X1 549 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 C7P10643 843 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 KRT10P13645 584 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ITPKAP23677 461 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CTNNA2P26232 953 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ACSL1P33121 698 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CTNNA1P35221 906 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 GARSP41250 739 aaKnown RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 PTGER3P43115 390 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 TNNT3P45378 269 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 MMP13P45452 471 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 CCR5P51681 352 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 SUOXP51687 545 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ARSEP51690 589 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 ADPRHP54922 357 aa5.48□□□□□ -1.53
HMGB1P40-201ENST00000525121 RWDD2BP57060 319 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms