RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 INVSQ9Y283 1065 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.37■□□□□ 0.05
SF3B2-202ENST00000524475 WASF2Q9Y6W5 498 aa15.37■□□□□ 0.05
SF3B2-202ENST00000524475 GON4LQ3T8J9 2241 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 LAMA1P25391 3075 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 BCLAF3A2AJT9 711 aaKnown RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 LRRD1A4D1F6 860 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 J3KR12 359 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 DFFAO00273 331 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 FOXD2O60548 495 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 NDUFS2O75306 463 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 POP4O95707 220 aaKnown RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 KRT1P04264 644 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 ZFXP17010 805 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CTNNA1P35221 906 aaKnown RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CSNK1DP48730 415 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CCZ1BP86790 482 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CCZ1P86791 482 aaPredicted RBP15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CCDC15Q0P6D6 951 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 GALNT2Q10471 571 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 PLA2G2CQ5R387 149 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 ZFYVE27Q5T4F4 411 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CACUL1Q86Y37 369 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 ATPAF2Q8N5M1 289 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CHST14Q8NCH0 376 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 PPP1R16AQ96I34 528 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 GDAP1L1Q96MZ0 367 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 OSBPL1AQ9BXW6 950 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 TNKS2Q9H2K2 1166 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 SP110Q9HB58 689 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 KLHL11Q9NVR0 708 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 NCDNQ9UBB6 729 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 LHX3Q9UBR4 397 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 SARDHQ9UL12 918 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 HYOU1Q9Y4L1 999 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 ACTL7AQ9Y615 435 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 CFAP54Q96N23 3096 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 RALGAPA1Q6GYQ0 2036 aa15.36■□□□□ 0.05
SF3B2-202ENST00000524475 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 CCDC66A2RUB6 948 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 GRID2IPA4D2P6 1211 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 MFSD11O43934 449 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 MAFKO60675 156 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 SEMA4FO95754 770 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 IGSF6O95976 241 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 MX2P20592 715 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 CTNNA2P26232 953 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 HSPA9P38646 679 aaKnown RBP15.35■□□□□ 0.05
SF3B2-202ENST00000524475 ZNF33AQ06730 810 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 NSUN2Q08J23 767 aaKnown RBP eCLIP15.35■□□□□ 0.05
SF3B2-202ENST00000524475 GRM3Q14832 879 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 CYTH1Q15438 398 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 LPAL2Q16609 132 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 ODF2Q5BJF6 829 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 LYSMD4Q5XG99 296 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 TMEFF1Q8IYR6 380 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 SYCE1Q8N0S2 351 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 HDDC3Q8N4P3 179 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 EXD1Q8NHP7 514 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 KIAA1524Q8TCG1 905 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 DNASE2BQ8WZ79 361 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 VOPP1Q96AW1 172 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 RBM41Q96IZ5 413 aaKnown RBP15.35■□□□□ 0.05
SF3B2-202ENST00000524475 PDLIM2Q96JY6 352 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 TSGA13Q96PP4 275 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 OMDQ99983 421 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 HDAC8Q9BY41 377 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 CPEB1Q9BZB8 566 aaKnown RBP15.35■□□□□ 0.05
SF3B2-202ENST00000524475 TM6SF2Q9BZW4 377 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 GOLPH3Q9H4A6 298 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 HECAQ9UBI9 543 aaPredicted RBP15.35■□□□□ 0.05
SF3B2-202ENST00000524475 SERGEFQ9UGK8 458 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 PCDHA3Q9Y5H8 950 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 CACNA1EQ15878 2313 aa15.35■□□□□ 0.05
SF3B2-202ENST00000524475 A0A1W2PP55 124 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 PLRG1O43660 514 aaKnown RBP15.34■□□□□ 0.05
SF3B2-202ENST00000524475 KRT86O43790 486 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 LEFTY1O75610 366 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 PALMO75781 387 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 RNASEH2AO75792 299 aaKnown RBP15.34■□□□□ 0.05
SF3B2-202ENST00000524475 ZRANB2O95218 330 aaKnown RBP eCLIP15.34■□□□□ 0.05
SF3B2-202ENST00000524475 PEX11BO96011 259 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 TGM1P22735 817 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 ITGB7P26010 798 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 ACSL1P33121 698 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
SF3B2-202ENST00000524475 CDKN2BP42772 138 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 MAPK8P45983 427 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 RENBPP51606 427 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 ADPRHP54922 357 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 NAP1L1P55209 391 aaKnown RBP15.34■□□□□ 0.05
SF3B2-202ENST00000524475 COPS2P61201 443 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 RHOAP61586 193 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 RAD51Q06609 339 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 PPP2R5EQ16537 467 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 MYLK3Q32MK0 819 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 SYCP2LQ5T4T6 812 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 AGBL4Q5VU57 503 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
SF3B2-202ENST00000524475 ARHGAP36Q6ZRI8 547 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 344.6 ms