RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	RRP7A	Q9Y3A4	280 aa	Known RBP	5.08	□□□□□ -1.6
SREK1-213	ENST00000523655	CDY1	Q9Y6F8	540 aa		5.08	□□□□□ -1.6
SREK1-213	ENST00000523655	CCDC88A	Q3V6T2	1871 aa		5.08	□□□□□ -1.6
SREK1-213	ENST00000523655	NSD3	Q9BZ95	1437 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	POLR3A	O14802	1390 aa	Predicted RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TIAM2	Q8IVF5	1701 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	FAM170A	A1A519	330 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655		E7EVH7	732 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	SPTLC2	O15270	562 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	P4HA2	O15460	535 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	DHH	O43323	396 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	SPRY2	O43597	315 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	RGS10	O43665	173 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TSPAN3	O60637	253 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	GCAT	O75600	419 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TFRC	P02786	760 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	SLC3A2	P08195	630 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	UQCRC1	P31930	480 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	PTDSS1	P48651	473 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	MCM2	P49736	904 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	DIO1	P49895	249 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	CDK7	P50613	346 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	KRTAP10-9	P60411	292 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ARF3	P61204	181 aa	Predicted RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ARF1	P84077	181 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	CUL4A	Q13619	759 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ATP1A4	Q13733	1029 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	CCNI	Q14094	377 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	SEC23B	Q15437	767 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	CERCAM	Q5T4B2	595 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655		Q7L0L9	218 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	R3HCC1L	Q7Z5L2	792 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TECPR1	Q7Z6L1	1165 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ARMC8	Q8IUR7	673 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	NRAC	Q8N912	160 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	SMCR8	Q8TEV9	937 aa	Predicted RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TBC1D22A	Q8WUA7	517 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	GOLGA1	Q92805	767 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	C3orf49	Q96BT1	292 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	NSUN4	Q96CB9	384 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	CTHRC1	Q96CG8	243 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	WDYHV1	Q96HA8	205 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	FAM227B	Q96M60	508 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ZMAT2	Q96NC0	199 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ELAC1	Q9H777	363 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ACAD9	Q9H845	621 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ZCCHC17	Q9NP64	241 aa	Known RBP	5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	ZSCAN32	Q9NX65	697 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	TMOD4	Q9NZQ9	345 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	DNAJC16	Q9Y2G8	782 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	C5	P01031	1676 aa		5.07	□□□□□ -1.6
SREK1-213	ENST00000523655	PALLD	Q8WX93	1383 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	RRP9	O43818	475 aa	Known RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	KRT38	O76015	456 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	CELF2	O95319	508 aa	Known RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	SCGB1D1	O95968	90 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	VIP	P01282	170 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	DNTT	P04053	509 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	SRGAP2B	P0DMP2	458 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	AR	P10275	920 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	CYP19A1	P11511	503 aa	Predicted RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	APEH	P13798	732 aa	Known RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	ABCD3	P28288	659 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	NTSR1	P30989	418 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	NR4A2	P43354	598 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	GALNT2	Q10471	571 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	EIF4A2	Q14240	407 aa	Known RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	ZNF268	Q14587	947 aa	Predicted RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	KCNAB1	Q14722	419 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	GRM4	Q14833	912 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	TAF11	Q15544	211 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	BTBD16	Q32M84	506 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	ZNF750	Q32MQ0	723 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	ZNF260	Q3ZCT1	412 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	CERKL	Q49MI3	558 aa	Predicted RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	MANEAL	Q5VSG8	457 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	SNX30	Q5VWJ9	437 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	AWAT2	Q6E213	333 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	RINT1	Q6NUQ1	792 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	KRT74	Q7RTS7	529 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	METTL25	Q8N6Q8	603 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	NANOGP1	Q8N7R0	232 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	C11orf44	Q8N8P7	122 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	HAUS2	Q9NVX0	235 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	NDUFAF4	Q9P032	175 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	MAGED1	Q9Y5V3	778 aa	Predicted RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	BRCA2	P51587	3418 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	KIF1B	O60333	1816 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	RANBP2	P49792	3224 aa	Known RBP	5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	C4B	P0C0L5	1744 aa		5.06	□□□□□ -1.6
SREK1-213	ENST00000523655	CACNA1G	O43497	2377 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	VWA3A	A6NCI4	1184 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	FAM90A20P	A6NIJ5	464 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	EFCAB8	A8MWE9	144 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655		E5RJQ4	531 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	UBE2Q2L	H0YL09	131 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	PSMD9	O00233	223 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	ANP32C	O43423	234 aa		5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	DKC1	O60832	514 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
SREK1-213	ENST00000523655	NTN1	O95631	604 aa		5.05	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms