RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 TSGA13Q96PP4 275 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 POLR1EQ9GZS1 481 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 GLOD4Q9HC38 313 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
SDCBP-212ENST00000523483 DOCK4Q8N1I0 1966 aa9.5□□□□□ -0.89
SDCBP-212ENST00000523483 SMIM23A6NLE4 172 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PENKP01210 267 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PIRTP0C851 137 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CHRNA4P43681 627 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 RGRP47804 291 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 AFMIDQ63HM1 303 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 GRAMD4Q6IC98 578 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 WDR93Q6P2C0 686 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 ZDHHC24Q6UX98 284 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 LRRC49Q8IUZ0 686 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PDIK1LQ8N165 341 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 BBOF1Q8ND07 529 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 SUSD6Q92537 303 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 OXNAD1Q96HP4 312 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 FICDQ9BVA6 458 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 WHRNQ9P202 907 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 TRHDEQ9UKU6 1024 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PCDHGC4Q9Y5F7 938 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 GON4LQ3T8J9 2241 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CCDC151A5D8V7 595 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PIAS1O75925 651 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 HLA-EP13747 358 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 RECQLP46063 649 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 ST8SIA6P61647 398 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 ECT2LQ008S8 904 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 FASTKD3Q14CZ7 662 aaKnown RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PARP6Q2NL67 630 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 ITPRIPL2Q3MIP1 535 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 RNASEH2BQ5TBB1 312 aaKnown RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 Q6ZVU0 165 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 OR52K1Q8NGK4 314 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 EXOC4Q96A65 974 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 RMDN1Q96DB5 314 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 IFT43Q96FT9 208 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 VAT1Q99536 393 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PHF7Q9BWX1 381 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 GBA3Q9H227 469 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CENPHQ9H3R5 247 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 SCUBE2Q9NQ36 999 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 EVLQ9UI08 416 aaPredicted RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CHMP2BQ9UQN3 213 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 SDK1Q7Z5N4 2213 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 WASH3PC4AMC7 463 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 DYNC1I1O14576 645 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 NARSO43776 548 aaKnown RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 AGTP01019 485 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 FCHO2Q0JRZ9 810 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 HTR4Q13639 388 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 SEPT6Q14141 434 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 DLG2Q15700 870 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CCDC38Q502W7 563 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 FNDC3BQ53EP0 1204 aaKnown RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 C2orf27AQ580R0 203 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 CFAP58Q5T655 872 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 PGBD5Q8N414 524 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 NXPE3Q969Y0 559 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 E2F7Q96AV8 911 aa9.49□□□□□ -0.89
SDCBP-212ENST00000523483 TRIM56Q9BRZ2 755 aaKnown RBP9.49□□□□□ -0.89
SDCBP-212ENST00000523483 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 GOLGA6BA6NDN3 693 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 A8MX80 341 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ATP5BP06576 529 aaKnown RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 FDFT1P37268 417 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 GALNT3Q14435 633 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 MORF4L2Q15014 288 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 BRD3Q15059 726 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 EMC10Q5UCC4 262 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 TMEM215Q68D42 235 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 SERPINA13PQ6UXR4 307 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 PCGF5Q86SE9 256 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 HOOK3Q86VS8 718 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ACDQ96AP0 544 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 CFAP36Q96G28 342 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ACE2Q9BYF1 805 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ZDHHC6Q9H6R6 413 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 NOD2Q9HC29 1040 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 FBRSL1Q9HCM7 1045 aaKnown RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 PRRT4C9JH25 899 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 STK25O00506 426 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 CHADO15335 359 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 CACNG3O60359 315 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 PEX11BO96011 259 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 SERPINF2P08697 491 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ECHS1P30084 290 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 EPHB1P54762 984 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 ARL4CP56559 192 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 IFI35P80217 286 aaPredicted RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 SARNPP82979 210 aaKnown RBP9.48□□□□□ -0.89
SDCBP-212ENST00000523483 SEMG2Q02383 582 aa9.48□□□□□ -0.89
SDCBP-212ENST00000523483 NIPAL4Q0D2K0 466 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms