RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 PLEKHG1Q9ULL1 1385 aa6.43□□□□□ -1.38
CPNE3-206ENST00000523469 A0A0G2JK05 382 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 LY6G6EA0A0G2JKS1 128 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 SOCS2O14508 198 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 SLC12A1Q13621 1099 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 TAF12Q16514 161 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 C5orf22Q49AR2 442 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 ALG10Q5BKT4 473 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 ALG10BQ5I7T1 473 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 FAM171A1Q5VUB5 890 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 AADACL2Q6P093 401 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 B4GALNT4Q76KP1 1039 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 IGFN1Q86VF2 1251 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 TMEM217Q8N7C4 229 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 CENPIQ92674 756 aaPredicted RBP6.42□□□□□ -1.38
CPNE3-206ENST00000523469 MASTLQ96GX5 879 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 TWNKQ96RR1 684 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 CADM1Q9BY67 442 aaKnown RBP6.42□□□□□ -1.38
CPNE3-206ENST00000523469 ZNF304Q9HCX3 659 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 ZNF521Q96K83 1311 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 LAMC1P11047 1609 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 NUP188Q5SRE5 1749 aa6.42□□□□□ -1.38
CPNE3-206ENST00000523469 FYCO1Q9BQS8 1478 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 TRPM2O94759 1503 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 TSPAN3O60637 253 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 CYP2J2P51589 502 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 ARHGAP8P85298 464 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 INPP5JQ15735 1006 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-206ENST00000523469 MAP3K21Q5TCX8 1036 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 KDELC2Q7Z4H8 507 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 CCDC25Q86WR0 208 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 MMP21Q8N119 569 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 NCSTNQ92542 709 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 MSI2Q96DH6 328 aaKnown RBP6.41□□□□□ -1.38
CPNE3-206ENST00000523469 UBXN10Q96LJ8 280 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 FRG2BQ96QU4 278 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
CPNE3-206ENST00000523469 ACAD9Q9H845 621 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 SEMA4BQ9NPR2 832 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-206ENST00000523469 CD207Q9UJ71 328 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 SUFUQ9UMX1 484 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 PCDHA12Q9UN75 941 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 GDAQ9Y2T3 454 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 CEP350Q5VT06 3117 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 PLCH1Q4KWH8 1693 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 RREB1Q92766 1687 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 EEA1Q15075 1411 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 ARHGAP31Q2M1Z3 1444 aa6.41□□□□□ -1.38
CPNE3-206ENST00000523469 RPRD2Q5VT52 1461 aaKnown RBP6.41□□□□□ -1.38
CPNE3-206ENST00000523469 NRKQ7Z2Y5 1582 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 PTPN23Q9H3S7 1636 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 LOC102724159A0A0B4J2E5 919 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 VWA3AA6NCI4 1184 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 ATG13O75143 517 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 FCGR2AP12318 317 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 CKMT1AP12532 417 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 SLC16A2P36021 539 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 NR4A2P43354 598 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 ALDH7A1P49419 539 aaKnown RBP6.4□□□□□ -1.38
CPNE3-206ENST00000523469 LAMB3Q13751 1172 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 BYSLQ13895 437 aaKnown RBP6.4□□□□□ -1.38
CPNE3-206ENST00000523469 PWP2Q15269 919 aaKnown RBP6.4□□□□□ -1.38
CPNE3-206ENST00000523469 TWIST1Q15672 202 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 TTLL5Q6EMB2 1281 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 AAGABQ6PD74 315 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 LRRTM4Q86VH4 590 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 NRACQ8N912 160 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 PPM1EQ8WY54 764 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 HERVK_113Q902F9 699 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 HMCESQ96FZ2 354 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.4□□□□□ -1.38
CPNE3-206ENST00000523469 HIPK3Q9H422 1215 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
CPNE3-206ENST00000523469 RNF146Q9NTX7 359 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 DECR2Q9NUI1 292 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 COG5Q9UP83 839 aa6.4□□□□□ -1.38
CPNE3-206ENST00000523469 MTUS2Q5JR59 1369 aa6.4□□□□□ -1.39
CPNE3-206ENST00000523469 MYOM2P54296 1465 aa6.4□□□□□ -1.39
CPNE3-206ENST00000523469 ARHGEF5Q12774 1597 aa6.4□□□□□ -1.39
CPNE3-206ENST00000523469 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-206ENST00000523469 A0A1W2PPC1 479 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 ANP32CO43423 234 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 DHX16O60231 1041 aaKnown RBP6.39□□□□□ -1.39
CPNE3-206ENST00000523469 CPA1P15085 419 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 KLRC2P26717 231 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 GJC1P36383 396 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 UBE3AQ05086 875 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 GAD2Q05329 585 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 IDI1Q13907 227 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 ENTPD8Q5MY95 495 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 MANEAQ5SRI9 462 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 UNC5CLQ8IV45 518 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 CPOQ8IVL8 374 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 SCAIQ8N9R8 606 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 ZNF548Q8NEK5 533 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-206ENST00000523469 ZNF419Q96HQ0 510 aaPredicted RBP6.39□□□□□ -1.39
CPNE3-206ENST00000523469 REEP2Q9BRK0 252 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 IFT27Q9BW83 186 aa6.39□□□□□ -1.39
CPNE3-206ENST00000523469 CTDSP1Q9GZU7 261 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms