RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 RABIFP47224 123 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 NEK3P51956 506 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PLK1P53350 603 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 INHBCP55103 352 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 RPS21P63220 83 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 NNTQ13423 1086 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 AUHQ13825 339 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 NFIL3Q16649 462 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 TMEM259Q4ZIN3 620 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 LRRC73Q5JTD7 316 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 ESRP1Q6NXG1 681 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 RD3Q7Z3Z2 195 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 DCP2Q8IU60 420 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PHACTR4Q8IZ21 702 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 UBR7Q8N806 425 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 GRAMD1AQ96CP6 724 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 FAXDC2Q96IV6 333 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 FEM1CQ96JP0 617 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 HSFY1Q96LI6 401 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 PRMT1Q99873 361 aaKnown RBP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 SPON2Q9BUD6 331 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 LRRC61Q9BV99 259 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 EPN3Q9H201 632 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 ZDHHC6Q9H6R6 413 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.88□□□□□ -0.51
SDCBP-211ENST00000523441 VPS51Q9UID3 782 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 HS3ST3A1Q9Y663 406 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 CSNK1G3Q9Y6M4 447 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 CHD5Q8TDI0 1954 aa11.88□□□□□ -0.51
SDCBP-211ENST00000523441 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 YY2O15391 372 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 CNTN5O94779 1100 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 ITGB2P05107 769 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 LIPCP11150 499 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 KRT5P13647 590 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 ADRB3P13945 408 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 TSHRP16473 764 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 GKP32189 559 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 ETV5P41161 510 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 OXCT1P55809 520 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 YWHAZP63104 245 aaKnown RBP11.87□□□□□ -0.51
SDCBP-211ENST00000523441 KRT83P78385 493 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 DNM1Q05193 864 aaKnown RBP11.87□□□□□ -0.51
SDCBP-211ENST00000523441 TTC39BQ5VTQ0 682 aaPredicted RBP11.87□□□□□ -0.51
SDCBP-211ENST00000523441 C22orf39Q6P5X5 142 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 DPY19L3Q6ZPD9 716 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 TFAP2DQ7Z6R9 452 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 VPS36Q86VN1 386 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 DEFB106AQ8N104 65 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 GUF1Q8N442 669 aaKnown RBP11.87□□□□□ -0.51
SDCBP-211ENST00000523441 KYQ8NBH2 561 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 TMIEQ8NEW7 156 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 OR6K2Q8NGY2 324 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 HTR3CQ8WXA8 447 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 NAT6Q93015 286 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 PPP1R16AQ96I34 528 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 NT5C1BQ96P26 610 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 PPP1R9BQ96SB3 815 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 PSMB7Q99436 277 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 BOCQ9BWV1 1114 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 SLC13A1Q9BZW2 595 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 CLPBQ9H078 707 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 SLC25A18Q9H1K4 315 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 POPDC2Q9HBU9 364 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 FOXJ2Q9P0K8 574 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 SEPT10Q9P0V9 454 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 PNMA8BQ9ULN7 279 aaPredicted RBP11.87□□□□□ -0.51
SDCBP-211ENST00000523441 LOXL2Q9Y4K0 774 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 PCDHB11Q9Y5F2 797 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 HS3ST4Q9Y661 456 aa11.87□□□□□ -0.51
SDCBP-211ENST00000523441 A0A0D9SEW6 157 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 SART1O43290 800 aaKnown RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 LZTS3O60299 673 aaPredicted RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 SFTPCP11686 197 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 CCR1P32246 355 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 CDK17Q00537 523 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 ZCWPW2Q504Y3 356 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 ALFQ53S48 1182 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 KIAA1161Q6NSJ0 714 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 PARS2Q7L3T8 475 aaKnown RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 HID1Q8IV36 788 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 ARHGEF19Q8IW93 802 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 OR7D4Q8NG98 312 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 PCDH19Q8TAB3 1148 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 BTN2A2Q8WVV5 523 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 USP7Q93009 1102 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 LIN37Q96GY3 246 aaPredicted RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 INTS4Q96HW7 963 aaKnown RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
SDCBP-211ENST00000523441 OR51B4Q9Y5P0 310 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 FADS3Q9Y5Q0 445 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 ACTL7AQ9Y615 435 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 UNC13CQ8NB66 2214 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 ANKRD36A6QL64 1941 aa11.86□□□□□ -0.51
SDCBP-211ENST00000523441 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
SDCBP-211ENST00000523441 BLACEA4D250 179 aa11.85□□□□□ -0.51
SDCBP-211ENST00000523441 D6RAR5 112 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms