RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 RPS21P63220 83 aaKnown RBP26.46■■□□□ 1.83
PVT1-219ENST00000523427 DEFB133Q30KQ1 61 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 GUSBP11Q6P575 273 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 SLC26A9Q7LBE3 791 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 FAM181AQ8N9Y4 354 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 LMX1AQ8TE12 382 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 IFT43Q96FT9 208 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 ATXN7L3BQ96GX2 97 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 FEM1CQ96JP0 617 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 ASCL3Q9NQ33 180 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.46■■□□□ 1.83
PVT1-219ENST00000523427 HS3ST3A1Q9Y663 406 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 WASF2Q9Y6W5 498 aa26.46■■□□□ 1.83
PVT1-219ENST00000523427 TRPM6Q9BX84 2022 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 DXOO77932 396 aaKnown RBP26.45■■□□□ 1.82
PVT1-219ENST00000523427 CXCR3P49682 368 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 CLCN6P51797 869 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 PTK2Q05397 1052 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 DEUP1Q05D60 604 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 SETD3Q86TU7 594 aaPredicted RBP26.45■■□□□ 1.82
PVT1-219ENST00000523427 DCP2Q8IU60 420 aaKnown RBP26.45■■□□□ 1.82
PVT1-219ENST00000523427 NPY6RQ99463 290 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 ARHGEF38Q9NXL2 777 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 APEX2Q9UBZ4 518 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 KLF15Q9UIH9 416 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 PCDHGC3Q9UN70 934 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 ATMQ13315 3056 aa26.45■■□□□ 1.82
PVT1-219ENST00000523427 H3BM21 787 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 CSF2P04141 144 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 PNMA6AP0CW24 399 aaPredicted RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 KRT10P13645 584 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 ADRB3P13945 408 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 SNX16P57768 344 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 SGCGQ13326 291 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 PDE1CQ14123 709 aaPredicted RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 DRAP1Q14919 205 aaPredicted RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 BRMS1LQ5PSV4 323 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 ZCCHC8Q6NZY4 707 aaKnown RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 FOXR2Q6PJQ5 311 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 KYAT3Q6YP21 454 aaKnown RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 GBP6Q6ZN66 633 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 ZNF683Q8IZ20 524 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 RYBPQ8N488 228 aaPredicted RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 SHC3Q92529 594 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 FAM81BQ96LP2 452 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 TBCBQ99426 244 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 USP29Q9HBJ7 922 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 STAP1Q9ULZ2 295 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 FCF1Q9Y324 198 aaKnown RBP26.44■■□□□ 1.82
PVT1-219ENST00000523427 FADS3Q9Y5Q0 445 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 ACTL7AQ9Y615 435 aa26.44■■□□□ 1.82
PVT1-219ENST00000523427 SPTY2D1-AS1A0A0U1RR47 76 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 IGLON5A6NGN9 336 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 CAPN8A6NHC0 703 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 FGFR1OPO95684 399 aaKnown RBP26.43■■□□□ 1.82
PVT1-219ENST00000523427 NME1P15531 152 aaKnown RBP26.43■■□□□ 1.82
PVT1-219ENST00000523427 JUNDP17535 347 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 VAC14Q08AM6 782 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 TPRG1LQ5T0D9 272 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 KIAA1161Q6NSJ0 714 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 RETSATQ6NUM9 610 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 SLC47A2Q86VL8 602 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 PARGQ86W56 976 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 FAM174AQ8TBP5 190 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 HEPHQ9BQS7 1158 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 PDCL3Q9H2J4 239 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 ZDHHC6Q9H6R6 413 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 SYNDIG1Q9H7V2 258 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 ATP13A1Q9HD20 1204 aa26.43■■□□□ 1.82
PVT1-219ENST00000523427 AJAP1Q9UKB5 411 aaPredicted RBP26.43■■□□□ 1.82
PVT1-219ENST00000523427 A0A1W2PNU3 283 aaPredicted RBP26.42■■□□□ 1.82
PVT1-219ENST00000523427 PMS2P1A4D2B8 440 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 DRGXA6NNA5 263 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 NEMP1O14524 444 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 FPGTO14772 594 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 MUSKO15146 869 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 AQP9O43315 295 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 ZNF821O75541 412 aaPredicted RBP26.42■■□□□ 1.82
PVT1-219ENST00000523427 L1CAMP32004 1257 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 GKP32189 559 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 RABIFP47224 123 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 CCNHP51946 323 aaPredicted RBP26.42■■□□□ 1.82
PVT1-219ENST00000523427 C1orf61Q13536 156 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 CARD16Q5EG05 197 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 PARS2Q7L3T8 475 aaKnown RBP26.42■■□□□ 1.82
PVT1-219ENST00000523427 DRC7Q8IY82 874 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 OR6K2Q8NGY2 324 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 IL12RB2Q99665 862 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 DPH1Q9BZG8 443 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 TM6SF2Q9BZW4 377 aa26.42■■□□□ 1.82
PVT1-219ENST00000523427 CASC3O15234 703 aaKnown RBP26.41■■□□□ 1.82
PVT1-219ENST00000523427 SPINT1O43278 529 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 ITGB7P26010 798 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 SERPINH1P50454 418 aaKnown RBP26.41■■□□□ 1.82
PVT1-219ENST00000523427 EXOC3L4Q17RC7 722 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 KIAA1614Q5VZ46 1190 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 RBFAQ8N0V3 343 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 ZNF397Q8NF99 534 aaPredicted RBP26.41■■□□□ 1.82
PVT1-219ENST00000523427 RRN3Q9NYV6 651 aa26.41■■□□□ 1.82
PVT1-219ENST00000523427 ITM2BQ9Y287 266 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms