RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SLC27A6Q9Y2P4 619 aa4.16□□□□□ -1.74
SKP1-209ENST00000522552 KDRP35968 1356 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SCO2A0A1W2PP80 73 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 HTR3EA5X5Y0 456 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 CDHR4A6H8M9 788 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SLC9B1P1A6NJY1 282 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 KPNA7A9QM74 516 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 AVILO75366 819 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TACC1O75410 805 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 KIAA0754O94854 1291 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 HMGCRP04035 888 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 ATXN1LP0C7T5 689 aaKnown RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 UROSP10746 265 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 PDGFRAP16234 1089 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 CHRM3P20309 590 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 LRPAP1P30533 357 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SKIV2L2P42285 1042 aaKnown RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 KIR2DL3P43628 341 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 CAMPP49913 170 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 RAB28P51157 221 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 EFNA5P52803 228 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 KIAA1024LP59773 190 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SATB1Q01826 763 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 MECOMQ03112 1051 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 PTH1RQ03431 593 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 DMTNQ08495 405 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 IKQ13123 557 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 RRS1Q15050 365 aaKnown RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 ACOX1Q15067 660 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TWISTNBQ3B726 338 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 CCDC40Q4G0X9 1142 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 HSP90AB3PQ58FF7 597 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 HEPHL1Q6MZM0 1159 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 CLEC9AQ6UXN8 241 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 DPP8Q6V1X1 898 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 GLDNQ6ZMI3 551 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 KCTD9Q7L273 389 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 PRRT2Q7Z6L0 340 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 IQCHQ86VS3 1027 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 IGDCC3Q8IVU1 814 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 KLHL7Q8IXQ5 586 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TMEFF1Q8IYR6 380 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 AFAP1Q8N556 730 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 ANKS4BQ8N8V4 417 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 NHLRC2Q8NBF2 726 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 RBM15BQ8NDT2 890 aaKnown RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 MAFAQ8NHW3 353 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 BCAS4Q8TDM0 211 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TMEM171Q8WVE6 324 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 ANKRD49Q8WVL7 239 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 NPIPB3Q92617 1050 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 RAB7BQ96AH8 199 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TUBGCP3Q96CW5 907 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 PRR11Q96HE9 360 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 GAL3ST4Q96RP7 486 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 EIF3CQ99613 913 aaKnown RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 ZPBPQ9BS86 351 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 TLR10Q9BXR5 811 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 GLIS2Q9BZE0 524 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 XYLT2Q9H1B5 865 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 HRH4Q9H3N8 390 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 BCAS3Q9H6U6 928 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SERINC1Q9NRX5 453 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 FBXO28Q9NVF7 368 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 ETAA1Q9NY74 926 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 IL1RAPL1Q9NZN1 696 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 FAM153AQ9UHL3 310 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 SLC12A4Q9UP95 1085 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 WDR37Q9Y2I8 494 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 UBE2J1Q9Y385 318 aaPredicted RBP4.15□□□□□ -1.75
SKP1-209ENST00000522552 PCDHB2Q9Y5E7 798 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 PNPLA7Q6ZV29 1317 aa4.15□□□□□ -1.75
SKP1-209ENST00000522552 FER1L4A9Z1Z3 1794 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 LOC100509620A0A075B734 347 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 KDM4EB2RXH2 506 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 CCDC188H7C350 402 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 PRICKLE3O43900 615 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 IPO7O95373 1038 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 CYBBP04839 570 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 GALTP07902 379 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 MMP2P08253 660 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 HSPA5P11021 654 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 ARSAP15289 507 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CD19P15391 556 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 MGAT1P26572 445 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 UQCRC1P31930 480 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CASRP41180 1078 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 SSR1P43307 286 aaKnown RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 PXNP49023 591 aaPredicted RBP4.14□□□□□ -1.75
SKP1-209ENST00000522552 KHKP50053 298 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 GATMP50440 423 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 FOXL2P58012 376 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 NKX3-2P78367 333 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 RUNX1T1Q06455 604 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CDK18Q07002 472 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 HSP90B2PQ58FF3 399 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CAVIN4Q5BKX8 364 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 CCDC144NLQ6NUI1 221 aa4.14□□□□□ -1.75
SKP1-209ENST00000522552 TSSK4Q6SA08 328 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms