RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 A0A1W2PPZ6 126 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 A0A1W2PR77 199 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 TCAF2A6NFQ2 919 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 LRRC72A6NJI9 287 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 WNT9AO14904 365 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 RNASEH2AO75792 299 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 WNT1P04628 370 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 PNMA6AP0CW24 399 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 VAV1P15498 845 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 MTIF2P46199 727 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 PSMD8P48556 350 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 SLC6A3Q01959 620 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 SCAPQ12770 1279 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 MTA1Q13330 715 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 ELAVL3Q14576 367 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 MAN2A1Q16706 1144 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 C5orf22Q49AR2 442 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 RABGAP1LQ5R372 815 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 OTUD1Q5VV17 481 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 RNF219Q5W0B1 726 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 SLC26A9Q7LBE3 791 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 TMPRSS7Q7RTY8 843 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 C14orf80Q86SX3 495 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 SLC47A2Q86VL8 602 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 OR52K2Q8NGK3 314 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 FAM131CQ96AQ9 280 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 NOX5Q96PH1 765 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 OMDQ99983 421 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 FEM1AQ9BSK4 669 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 BHLHE41Q9C0J9 482 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 COX16Q9P0S2 106 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 PPM1HQ9ULR3 514 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 CEP83Q9Y592 693 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 HS3ST4Q9Y661 456 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 MYH10P35580 1976 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 LAMA1P25391 3075 aa9.53□□□□□ -0.88
CTNNA1-221ENST00000520339 TNRC6BQ9UPQ9 1833 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NUMA1Q14980 2115 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 CHD6Q8TD26 2715 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 A0A1B0GTQ1 180 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 TNFSF14O43557 240 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 DFNA5O60443 496 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 PAGE1O75459 146 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 DAB1O75553 588 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 CDH5P33151 784 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 DRD3P35462 400 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 KRT9P35527 623 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NNMTP40261 264 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 GRK6P43250 576 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NUMBP49757 651 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 CCT8P50990 548 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 IRAK1P51617 712 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ADPRHP54922 357 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 C21orf59P57076 290 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 SNX16P57768 344 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 BPIFB4P59827 614 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NME3Q13232 169 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 SHBQ15464 509 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 VWA3BQ502W6 1294 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 MIIPQ5JXC2 388 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 PRAMEF14Q5SWL7 426 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ZDHHC17Q8IUH5 632 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 OR14C36Q8NHC7 312 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 RPRD1AQ96P16 312 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 SPAG5Q96R06 1193 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 PPP1R9BQ96SB3 815 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NPY6RQ99463 290 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ACE2Q9BYF1 805 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 NDST4Q9H3R1 872 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 CLSTN2Q9H4D0 955 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ANLNQ9NQW6 1124 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 ARHGEF38Q9NXL2 777 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 VANGL2Q9ULK5 521 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 TPX2Q9ULW0 747 aaKnown RBP9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 TBC1D30Q9Y2I9 924 aa9.52□□□□□ -0.89
CTNNA1-221ENST00000520339 FAM208BQ5VWN6 2430 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 DRGXA6NNA5 263 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 I6L893 689 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 M0QYT0 321 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 SLC7A4O43246 635 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 LATO43561 262 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 RRP9O43818 475 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 CLDN11O75508 207 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 SMNDC1O75940 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 CNTN5O94779 1100 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 ADCY5O95622 1261 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 MBD3O95983 291 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 IL1BP01584 269 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 ARAFP10398 606 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 TFE3P19532 575 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 ADH6P28332 368 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 GABRB2P47870 512 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 CXCR3P49682 368 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 METAP1P53582 386 aa9.51□□□□□ -0.89
CTNNA1-221ENST00000520339 CDH4P55283 916 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms