RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 MYBL2P10244 700 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TGM2P21980 687 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 IVDP26440 423 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TNFRSF8P28908 595 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 CCR1P32246 355 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 CA8P35219 290 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 CD96P40200 585 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 PPP3CCP48454 512 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TUBP50607 506 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 DRG2P55039 364 aaKnown RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 VCPP55072 806 aaKnown RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TBX4P57082 545 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 GUCY2DQ02846 1103 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 GPM6BQ13491 265 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 BYSLQ13895 437 aaKnown RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 VEPH1Q14D04 833 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 NOMO1Q15155 1222 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ARL13BQ3SXY8 428 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 WIPI1Q5MNZ9 446 aaPredicted RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 MANEALQ5VSG8 457 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 DUPD1Q68J44 220 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 NCBP2-AS2Q69YL0 99 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 KLHDC10Q6PID8 442 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 C1orf228Q6PIY5 440 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 CCDC149Q6ZUS6 474 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 RFX8Q6ZV50 586 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 GAREM2Q75VX8 874 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 RTL10Q7L3V2 364 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ITIH5Q86UX2 942 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TMC8Q8IU68 726 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 HID1Q8IV36 788 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 IFT20Q8IY31 132 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ZNF683Q8IZ20 524 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ZNF512Q96ME7 567 aaPredicted RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 RUNDC3BQ96NL0 473 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 SERPINB11Q96P15 392 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ERP44Q9BS26 406 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 FRMD8P1Q9BZ68 369 aaPredicted RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 RNF38Q9H0F5 515 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 NKX2-4Q9H2Z4 354 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 PRDM16Q9HAZ2 1276 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 EPB41L5Q9HCM4 733 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ARHGEF4Q9NR80 690 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ETNK2Q9NVF9 386 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TRPM5Q9NZQ8 1165 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 KIAA1522Q9P206 1035 aaPredicted RBP8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 OR12D3Q9UGF7 316 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 NEU3Q9UQ49 428 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 ASB3Q9Y575 518 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 TRANK1O15050 2925 aa8.08□□□□□ -1.12
CTHRC1-203ENST00000520337 SLC12A8A0AV02 714 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ESYT3A0FGR9 886 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 C2orf78A6NCI8 922 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EPOPA6NHQ4 379 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EEF2KO00418 725 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 TP73O15350 636 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 DAPK3O43293 454 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 CREB3O43889 395 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 SLITRK5O94991 958 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 CSPG5O95196 566 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 OLFM2O95897 454 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 OAS1P00973 400 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 SLC2A3P11169 496 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EPCAMP16422 314 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ZFXP17010 805 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ECHS1P30084 290 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 HOXC13P31276 330 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 BMP8BP34820 402 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ATP5C1P36542 298 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ARL4AP40617 200 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 NR2C2P49116 596 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 CARSP49589 748 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 KCNQ1P51787 676 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ZNF135P52742 658 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 MLLT6P55198 1093 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EIF3EP60228 445 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 GBE1Q04446 702 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 PTK6Q13882 451 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 SLBPQ14493 270 aaKnown RBP eCLIP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 PAFAH1B3Q15102 231 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 PIK3R6Q5UE93 754 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 SYDE1Q6ZW31 735 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 C14orf80Q86SX3 495 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 PRUNE1Q86TP1 453 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 DDX42Q86XP3 938 aaKnown RBP eCLIP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 MIB1Q86YT6 1006 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 CCDC105Q8IYK2 499 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 ALLCQ8N6M5 410 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EIF1ADQ8N9N8 165 aaKnown RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 GLIS1Q8NBF1 620 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 MICAL1Q8TDZ2 1067 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 P3H4Q92791 437 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 RNF34Q969K3 372 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 EXOC4Q96A65 974 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 COX4I2Q96KJ9 171 aa8.07□□□□□ -1.12
CTHRC1-203ENST00000520337 C1orf74Q96LT6 269 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms