RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAM90A22PA8MWA6 464 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAM90A12PA8MX19 464 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 FAM90A23PA8MXZ1 464 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMCC1O94876 653 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 PYGLP06737 847 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 POLBP06746 335 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 CHRM4P08173 479 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 MYZAPP0CAP1 466 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 CNTFP26441 200 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 PGM1P36871 562 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 CLCNKBP51801 687 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 GAD2Q05329 585 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 AP5B1Q2VPB7 878 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ENTPD8Q5MY95 495 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 SH2D4BQ5SQS7 431 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 NCAPH2Q6IBW4 605 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TRAPPC11Q7Z392 1133 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 WDR5BQ86VZ2 330 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 CAMK1DQ8IU85 385 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 LSM14AQ8ND56 463 aaKnown RBP3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 RFWD2Q8NHY2 731 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMEM174Q8WUU8 243 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF419Q96HQ0 510 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF333Q96JL9 665 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF778Q96MU6 729 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 POT1Q9NUX5 634 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 RNF7Q9UBF6 113 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TBX20Q9UMR3 447 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ICKQ9UPZ9 632 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 CNPY2Q9Y2B0 182 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 TARBP1Q13395 1621 aaKnown RBP3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 EHBP1L1Q8N3D4 1523 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 KIAA0586Q9BVV6 1533 aa3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 VIRMAQ69YN4 1812 aaKnown RBP3.54□□□□□ -1.84
HMGB1P41-201ENST00000520234 ANKRD30BQ9BXX2 1392 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZBED9Q6R2W3 1325 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZNF521Q96K83 1311 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 PTPN23Q9H3S7 1636 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 IGLV5-39A0A0G2JS06 123 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 MDM4O15151 490 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 NDUFB8O95169 186 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 EPN2O95208 641 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 UNGP13051 313 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 YWHAQP27348 245 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 NR4A2P43354 598 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 RASSF2P50749 326 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 NAA25Q14CX7 972 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 SLC18A3Q16572 532 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ASPHD1Q5U4P2 390 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 HMBOX1Q6NT76 420 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 MMS22LQ6ZRQ5 1243 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 PIM3Q86V86 326 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMC8Q8IU68 726 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 TMTC1Q8IUR5 882 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 GHDCQ8N2G8 530 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 IL17REQ8NFR9 667 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 TNIP2Q8NFZ5 429 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ZCCHC10Q8TBK6 192 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 BICD2Q8TD16 824 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 RAB40AQ8WXH6 277 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 HSPH1Q92598 858 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 CNOT9Q92600 299 aaKnown RBP3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 HVCN1Q96D96 273 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 MROH8Q9H579 483 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ENTPD7Q9NQZ7 604 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 ATP8A2Q9NTI2 1148 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 PPP1R14DQ9NXH3 145 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 C9orf78Q9NZ63 289 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 HDAC6Q9UBN7 1215 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 COG5Q9UP83 839 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 EPRSP07814 1512 aaKnown RBP3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 DENND4BO75064 1496 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 IFT140Q96RY7 1462 aa3.53□□□□□ -1.84
HMGB1P41-201ENST00000520234 CTTNBP2Q8WZ74 1663 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 A6NNC1 897 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CBX6O95503 412 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 SYF2O95926 243 aaKnown RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 SERPINC1P01008 464 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 IL1AP01583 271 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CHRNB1P11230 501 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 BLKP51451 505 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 POU5F1BQ06416 359 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 PKP1Q13835 747 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CAMK1Q14012 370 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 RPE65Q16518 533 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 BAK1Q16611 211 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 NFIL3Q16649 462 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 Q5PR19 223 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 TBC1D9BQ66K14 1250 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 LVRNQ6Q4G3 990 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 ADGRG6Q86SQ4 1221 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 ESX1Q8N693 406 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 TSPYL6Q8N831 410 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 NRACQ8N912 160 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 KDM1BQ8NB78 822 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 ZMIZ2Q8NF64 920 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 CMASQ8NFW8 434 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 HTRA1Q92743 480 aa3.52□□□□□ -1.85
HMGB1P41-201ENST00000520234 VCPIP1Q96JH7 1222 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms