RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 MSH2P43246 934 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 MAGOHP61326 146 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 PPP2R2AP63151 447 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 NTHL1P78549 312 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 SKOR1P84550 965 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 GABPB1Q06547 395 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZNF77Q15935 545 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 INO80DQ53TQ3 878 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 FYB2Q5VWT5 728 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 POTEHQ6S545 545 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 KDELC1Q6UW63 502 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TMEM184AQ6ZMB5 413 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 MPP5Q8N3R9 675 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 SH2D3CQ8N5H7 860 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TTC16Q8NEE8 873 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 OR52K2Q8NGK3 314 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 SPATA22Q8NHS9 363 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 FIBINQ8TAL6 211 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 CDKL2Q92772 493 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TTC17Q96AE7 1141 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 ACDQ96AP0 544 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TADA1Q96BN2 335 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZNF419Q96HQ0 510 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 PAFAH2Q99487 392 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 MGME1Q9BQP7 344 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 DHRS4Q9BTZ2 278 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 C2orf49Q9BVC5 232 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 CNOT10Q9H9A5 744 aaKnown RBP15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 ARNT2Q9HBZ2 717 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 SYBUQ9NX95 663 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 EURLQ9NYK6 297 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 UBP1Q9NZI7 540 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 VPS28Q9UK41 221 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 ADAM21Q9UKJ8 722 aa15.29■□□□□ 0.04
TRAPPC9-205ENST00000518839 FAM237BA0A1B0GVD1 139 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 CBX4O00257 560 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 USP12O75317 370 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 PMPCBO75439 489 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 USP1O94782 785 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 ALDH1A2O94788 518 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 MT-CYBP00156 380 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 EPOP01588 193 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 INHBAP08476 426 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 SERPINF2P08697 491 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 CEBPBP17676 345 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 WNT3AP56704 352 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 DSC2Q02487 901 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 RALGPS1Q5JS13 557 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 ADGRD1Q6QNK2 874 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 RANBP10Q6VN20 620 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 LRRC6Q86X45 466 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 VN1R2Q8NFZ6 395 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 ARRDC2Q8TBH0 407 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 MRGPRX2Q96LB1 330 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 FEM1AQ9BSK4 669 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 SMG9Q9H0W8 520 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 NSUN3Q9H649 340 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 MRM3Q9HC36 420 aaKnown RBP15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 SOX13Q9UN79 622 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 OR51B4Q9Y5P0 310 aa15.28■□□□□ 0.04
TRAPPC9-205ENST00000518839 IQANK1A0A1B0GTG1 560 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 FAM159BA6NKW6 160 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SCAMP3O14828 347 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 GCAP28676 217 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 CSKP41240 450 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 CD86P42081 329 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 PLK1P53350 603 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 MAXP61244 160 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SLC20A2Q08357 652 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 NIPAL4Q0D2K0 466 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 LAMB3Q13751 1172 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 CRYMQ14894 314 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 TMED2Q15363 201 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SKIDA1Q1XH10 827 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 KBTBD12Q3ZCT8 623 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 PCID2Q5JVF3 399 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 LGSNQ5TDP6 509 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 TMC5Q6UXY8 1006 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 TPGS1Q6ZTW0 290 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SLC26A11Q86WA9 606 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 ARID3BQ8IVW6 561 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 PGBD5Q8N414 524 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 PPHLN1Q8NEY8 458 aaKnown RBP15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SLC44A1Q8WWI5 657 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 FEM1CQ96JP0 617 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 SEMA3CQ99985 751 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 MOCS1Q9NZB8 636 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 RPS6KL1Q9Y6S9 549 aa15.27■□□□□ 0.04
TRAPPC9-205ENST00000518839 EPOPA6NHQ4 379 aa15.26■□□□□ 0.03
TRAPPC9-205ENST00000518839 ZMPSTE24O75844 475 aa15.26■□□□□ 0.03
TRAPPC9-205ENST00000518839 PRAMEF12O95522 483 aa15.26■□□□□ 0.03
TRAPPC9-205ENST00000518839 PENKP01210 267 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC9-205ENST00000518839 MMP2P08253 660 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms