RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 CRIPAKQ8N1N5 446 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PGBD5Q8N414 524 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NME8Q8N427 588 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC25A41Q8N5S1 370 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CPSF7Q8N684 471 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 RTL3Q8N8U3 475 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 KDM1BQ8NB78 822 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 C2CD4AQ8NCU7 369 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SPATA22Q8NHS9 363 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SCAMP5Q8TAC9 235 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 RDH11Q8TC12 318 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 URGCPQ8TCY9 931 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HASPINQ8TF76 798 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GDPD5Q8WTR4 605 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PTCD2Q8WV60 388 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EDEM1Q92611 657 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GATA6Q92908 595 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MOCOSQ96EN8 888 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC10A4Q96EP9 437 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CELF6Q96J87 481 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PRICKLE1Q96MT3 831 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FAM161BQ96MY7 647 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRIB3Q96RU7 358 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 RANBP9Q96S59 729 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 VAT1Q99536 393 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 OLFM1Q99784 485 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 EPAS1Q99814 870 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TBL1YQ9BQ87 522 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACBD6Q9BR61 282 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MTG1Q9BT17 334 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FICDQ9BVA6 458 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FTHL17Q9BXU8 183 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACE2Q9BYF1 805 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC13A1Q9BZW2 595 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DRC3Q9H069 523 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IQCGQ9H095 443 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TKTL2Q9H0I9 626 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CRISPLD1Q9H336 500 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GSTO2Q9H4Y5 243 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 LRRC40Q9H9A6 602 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZNF408Q9H9D4 720 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 LRRC4Q9HBW1 653 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ARNT2Q9HBZ2 717 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GLOD4Q9HC38 313 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACSS2Q9NR19 701 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 BATF3Q9NR55 127 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CHST12Q9NRB3 414 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IGSF5Q9NSI5 407 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC38A7Q9NVC3 462 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 OXSMQ9NWU1 459 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DONSONQ9NYP3 566 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ZFATQ9P243 1243 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MARCH4Q9P2E8 410 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 XPR1Q9UBH6 696 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PPARGC1AQ9UBK2 798 aaKnown RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 HCSTQ9UBK5 93 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DNAJB4Q9UDY4 337 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CDH22Q9UJ99 828 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 VPS28Q9UK41 221 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRHDEQ9UKU6 1024 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SARDHQ9UL12 918 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CORO1CQ9ULV4 474 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GABRQQ9UN88 632 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ST3GAL5Q9UNP4 418 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SORCS3Q9UPU3 1222 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MED16Q9Y2X0 877 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TCAF1Q9Y4C2 921 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ST14Q9Y5Y6 855 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 IKBKGQ9Y6K9 419 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TLL2Q9Y6L7 1015 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CDH23Q9H251 3354 aa3.3□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NINQ8N4C6 2090 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FANCMQ8IYD8 2048 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SYNJ2BP-COX16A0A087WUM0 186 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 A0A0U1RQF3 1178 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FAM95CA0A1B0GW59 222 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 A0A1W2PQH9 124 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 CCDC78A2IDD5 438 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 DPPA5A6NC42 116 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TCAF2A6NFQ2 919 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NEMP2A6NFY4 417 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MROH6A6NGR9 719 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MANSC4A6NHS7 340 aaPredicted RBP3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ARHGAP42A6NI28 874 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 E9PAM4 449 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SPECC1L-ADORA2AF8WAN1 911 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GOLGA8TH3BQL2 631 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 FXYD1O00168 92 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GFRA2O00451 464 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 ACOT8O14734 319 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MUSKO15146 869 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 TRIM24O15164 1050 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MATN3O15232 486 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SLC22A2O15244 555 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 NCAM2O15394 837 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 GYG2O15488 501 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 SEPT4O43236 478 aa3.29□□□□□ -1.88
SCARNA20.6-201ENST00000517251 MAP3K7O43318 606 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms