RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 MAGEA6P43360 314 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ME1P48163 572 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAN2A2P49641 1150 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRIM1P49642 420 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FLT3LGP49771 235 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MEOX2P50222 304 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ETV1P50549 477 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CLCN7P51798 805 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MNAT1P51948 309 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FUT6P51993 359 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CACNB3P54284 484 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HDAC4P56524 1084 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SOX10P56693 466 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 WNT4P56705 351 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NRG3P56975 720 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ERVPABLB-1P60509 514 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZP1P60852 638 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ABCE1P61221 599 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HERV-K104P61576 105 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GNB1P62873 340 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TUBB4BP68371 445 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NOMO3P69849 1222 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ELF3P78545 371 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 QRFPP83859 136 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HOXC5Q00444 222 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PLCB2Q00722 1185 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MS4A2Q01362 244 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DEUP1Q05D60 604 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ENPEPQ07075 957 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SSRP1Q08945 709 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SREBF2Q12772 1141 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TCP10Q12799 353 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MAP4K2Q12851 820 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SFSWAPQ12872 951 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLAQ13239 276 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NOGQ13253 232 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IL15RAQ13261 267 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AP3B2Q13367 1082 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF211Q13398 564 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ORC1Q13415 861 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BOP1Q14137 746 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MLECQ14165 292 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCNJ12Q14500 433 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RAB3GAP1Q15042 981 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PDIA6Q15084 440 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NOMO1Q15155 1222 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IRF4Q15306 451 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PCBP2Q15366 365 aaKnown RBP eCLIP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NAB2Q15742 525 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF141Q15928 474 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 DPYSL2Q16555 572 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ARHGAP44Q17R89 818 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 C4orf26Q17RF5 130 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HNRNPUL2Q1KMD3 747 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KIZQ2M2Z5 673 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KIF19Q2TAC6 998 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PUS10Q3MIT2 529 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CRY2Q49AN0 593 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NADK2Q4G0N4 442 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ANO6Q4KMQ2 910 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CBWD6Q4V339 395 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ABCA11PQ4W5N1 156 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RFTN2Q52LD8 501 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 LINC00483Q53H64 154 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HSP90AB3PQ58FF7 597 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CBWD3Q5JTY5 395 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 Q5PR19 223 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CBWD5Q5RIA9 395 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZBTB41Q5SVQ8 909 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TSTD2Q5T7W7 516 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SH3PXD2AQ5TCZ1 1133 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 RSPH4AQ5TD94 716 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MANEALQ5VSG8 457 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 AADACL4Q5VUY2 407 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ANKRD22Q5VYY1 191 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NCR3LG1Q68D85 454 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF470Q6ECI4 717 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 IQCEQ6IPM2 695 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FAM71E1Q6IPT2 247 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PRR5LQ6MZQ0 368 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 HIBCHQ6NVY1 386 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 FIGNL1Q6PIW4 674 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 TXNDC11Q6PKC3 985 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CEMP1Q6PRD7 247 aaPredicted RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PATE2Q6UY27 113 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GDPD4Q6W3E5 623 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 MMS22LQ6ZRQ5 1243 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ZNF662Q6ZS27 426 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 KCTD8Q6ZWB6 473 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 Q6ZWC4 215 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 SLC26A9Q7LBE3 791 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 OTOP1Q7RTM1 612 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 ASCL5Q7RTU5 278 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PHF5AQ7RTV0 110 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 NEGR1Q7Z3B1 354 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 GPR155Q7Z3F1 870 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 CEACAM19Q7Z692 300 aa-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 PABPN1Q86U42 306 aaKnown RBP eCLIP-0.71□□□□□ -2.52
SCARNA20.2-201ENST00000516052 STK32CQ86UX6 486 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms