RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 PPP1R9BQ96SB3 815 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 FAM129BQ96TA1 746 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 THAP9Q9H5L6 903 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 FAM204AQ9H8W3 233 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 EBF2Q9HAK2 575 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 XPO7Q9UIA9 1087 aaKnown RBP9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLC25A13Q9UJS0 675 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 AK5Q9Y6K8 562 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 ATMQ13315 3056 aa9.16□□□□□ -0.94
CDC42SE2-212ENST00000515533 CHD5Q8TDI0 1954 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 COL6A6A6NMZ7 2263 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 SYNJ2BP-COX16A0A087WUM0 186 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 A0A1B0GVM2 712 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 A0A1W2PR77 199 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 TCAF2A6NFQ2 919 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 KCNU1A8MYU2 1149 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 E5RJQ4 531 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 C1QTNF3-AMACRE9PGA6 284 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 TLR4O00206 839 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 THAP12O43422 761 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 LATO43561 262 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 GNA14O95837 355 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 AFPP02771 609 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 H2AFB1P0C5Y9 115 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 H2AFB2P0C5Z0 115 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 SLC2A3P11169 496 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 PDGFRAP16234 1089 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 GNA15P30679 374 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 NUDT1P36639 197 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 ADH7P40394 386 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 RPL34P49207 117 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 NXPH1P58417 271 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 PPP2CBP62714 309 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 YWHAZP63104 245 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 PPP2CAP67775 309 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 SEMG2Q02383 582 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 MEA1Q16626 185 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 HS1BP3Q53T59 392 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 HES3Q5TGS1 186 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 FAM46CQ5VWP2 391 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 NAPEPLDQ6IQ20 393 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 CCAR2Q8N163 923 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 MFSD2AQ8NA29 543 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 LMO3Q8TAP4 145 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 PIP4K2CQ8TBX8 421 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 RNF34Q969K3 372 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 TIGD1Q96MW7 591 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 ERVMER34-1Q9H9K5 563 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 COX16Q9P0S2 106 aa9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 SCHIP1Q9P0W5 487 aaPredicted RBP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.15□□□□□ -0.94
CDC42SE2-212ENST00000515533 C9orf172C9J069 976 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 WNT9AO14904 365 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 RRP8O43159 456 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 SLC7A4O43246 635 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 IGLV3-25P01717 112 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 VAV1P15498 845 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ZNF18P17022 549 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 MAT2AP31153 395 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CCR1P32246 355 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 DRD3P35462 400 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 RXRGP48443 463 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ACADVLP49748 655 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 EPHA4P54764 986 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CLDN6P56747 220 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CDK17Q00537 523 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 OVGP1Q12889 678 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 MTA1Q13330 715 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 PDCLQ13371 301 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ILKQ13418 452 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 STAT4Q14765 748 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 SHBQ15464 509 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 SETMARQ53H47 684 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 TTI2Q6NXR4 508 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 DENND1BQ6P3S1 775 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ENOSF1Q7L5Y1 443 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 IQCHQ86VS3 1027 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CIR1Q86X95 450 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 TRIM59Q8IWR1 403 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ZNF606Q8WXB4 792 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 KREMEN1Q96MU8 473 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 RPRD1AQ96P16 312 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 INTS2Q9H0H0 1204 aaKnown RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 UBE2TQ9NPD8 197 aaPredicted RBP9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 DDIT4Q9NX09 232 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CYTH4Q9UIA0 394 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 CTNND2Q9UQB3 1225 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 DMTF1Q9Y222 760 aa9.14□□□□□ -0.95
CDC42SE2-212ENST00000515533 ANKRD36A6QL64 1941 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 PRAMEF26H0Y7S4 382 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 ALOX15BO15296 676 aa9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 PLRG1O43660 514 aaKnown RBP9.13□□□□□ -0.95
CDC42SE2-212ENST00000515533 HSF2BPO75031 334 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms