RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 DAPK3O43293 454 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 BNIP3LO60238 219 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 FSBPO95073 299 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 TMEM253P0C7T8 217 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 ITGB7P26010 798 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 IL1R2P27930 398 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 ARL4AP40617 200 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 CCNHP51946 323 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 METAP1P53582 386 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 ADKP55263 362 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 SNRPD1P62314 119 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 RACK1P63244 317 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 SLC25A11Q02978 314 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 DPYSQ14117 519 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 TEAD4Q15561 434 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 HADHQ16836 314 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 PPP6R3Q5H9R7 873 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 NEK5Q6P3R8 708 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 ZSCAN30Q86W11 494 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 OR2AP1Q8NGE2 309 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 MRFAP1L1Q96HT8 127 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 ORAI3Q9BRQ5 295 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 MIR1-1HGQ9H1L0 117 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 TNKS2Q9H2K2 1166 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 NHEJ1Q9H9Q4 299 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 CWC15Q9P013 229 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 CTTNBP2NLQ9P2B4 639 aa13.01□□□□□ -0.33
CLCN3-210ENST00000515420 RCOR3Q9P2K3 495 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 FCF1Q9Y324 198 aaKnown RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 TP53BP1Q12888 1972 aaPredicted RBP13.01□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3DA0A087WVF3 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3IA0A087WXS9 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3EA0A087X179 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 DCDC2BA2VCK2 349 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 FAM47DPA6NHR8 397 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3LB9A6J9 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 KPNA3O00505 521 aaPredicted RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 BUB1O43683 1085 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 PRAMEF11O60813 436 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 OPHN1O60890 802 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 LEFTY1O75610 366 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 GJB3O75712 270 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TMCC1O94876 653 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 POP4O95707 220 aaKnown RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 CER1O95813 267 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3HP0C7X1 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF883P0CG24 379 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 RARAP10276 462 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 ERCC2P18074 760 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 MAN1A1P33908 653 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 GRIK2Q13002 908 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 PIP5KL1Q5T9C9 394 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3CQ6IPX1 549 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 ZNF354CQ86Y25 554 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TBC1D3Q8IZP1 549 aaPredicted RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 MINDY1Q8N5J2 469 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 CHST14Q8NCH0 376 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 FAM71BQ8TC56 605 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 GRIN3AQ8TCU5 1115 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 GDAP1L1Q96MZ0 367 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 CHP1Q99653 195 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 OSBPL1AQ9BXW6 950 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 KLC2Q9H0B6 622 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 PDFQ9HBH1 243 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 TM9SF3Q9HD45 589 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 HECAQ9UBI9 543 aaPredicted RBP13□□□□□ -0.33
CLCN3-210ENST00000515420 INTUQ9ULD6 942 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 DMTF1Q9Y222 760 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 MFHAS1Q9Y4C4 1052 aa13□□□□□ -0.33
CLCN3-210ENST00000515420 AP1G1O43747 822 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 MTA2O94776 668 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 PROSCO94903 275 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 IGSF6O95976 241 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 TCF4P15884 667 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 MAPK8P45983 427 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 DNA2P51530 1060 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 NEK3P51956 506 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 TAS2R38P59533 333 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 RAD51Q06609 339 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 GRM3Q14832 879 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 ARSIQ5FYB1 569 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 KCNT1Q5JUK3 1230 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 ARHGAP12Q8IWW6 846 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 RHOT2Q8IXI1 618 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 RAB7BQ96AH8 199 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 ARRDC3Q96B67 414 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 SKA1Q96BD8 255 aa12.99□□□□□ -0.33
CLCN3-210ENST00000515420 GTPBP2Q9BX10 602 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms