RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 MANEALQ5VSG8 457 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 FAM72DQ6L9T8 149 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 ABI3BPQ7Z7G0 1075 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 FAM72BQ86X60 149 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
SNHG4-208ENST00000514110 OR4C6Q8NH72 309 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 SLC30A5Q8TAD4 765 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 RFFLQ8WZ73 363 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 PPP1R16AQ96I34 528 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 BMFQ96LC9 184 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 BBC3Q96PG8 261 aaPredicted RBP12.45□□□□□ -0.42
SNHG4-208ENST00000514110 HEPHQ9BQS7 1158 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 VPS16Q9H269 839 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 PPARGC1AQ9UBK2 798 aaKnown RBP12.45□□□□□ -0.42
SNHG4-208ENST00000514110 FADS3Q9Y5Q0 445 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 AK5Q9Y6K8 562 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 IGSF10Q6WRI0 2623 aa12.45□□□□□ -0.42
SNHG4-208ENST00000514110 BAHCC1Q9P281 2608 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 POM121BA6NF01 834 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 EPHB6O15197 1021 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 RAD51BO15315 384 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 PIAS2O75928 621 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 GJB6O95452 261 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 CYP1A1P04798 512 aaPredicted RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 MYF5P13349 255 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 MMP8P22894 467 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ITGB7P26010 798 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ITPKBP27987 946 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 L1CAMP32004 1257 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 GKP32189 559 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ADRA1BP35368 520 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 FMO1Q01740 532 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 CDR2Q01850 454 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 RTP5Q14D33 572 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ACAP1Q15027 740 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 CCDC14Q49A88 953 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ZNF542PQ5EBM4 170 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 CARD16Q5EG05 197 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 Q6ZSR6 202 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 PARS2Q7L3T8 475 aaKnown RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 PTAR1Q7Z6K3 402 aaPredicted RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 NLRP14Q86W24 1093 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ZNF677Q86XU0 584 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 GPT2Q8TD30 523 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 RXFP2Q8WXD0 754 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 VOPP1Q96AW1 172 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 SLC17A9Q9BYT1 436 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 TM6SF2Q9BZW4 377 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 NRSN2Q9GZP1 204 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 ZDHHC6Q9H6R6 413 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 GPR27Q9NS67 375 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 HECAQ9UBI9 543 aaPredicted RBP12.44□□□□□ -0.42
SNHG4-208ENST00000514110 OR12D3Q9UGF7 316 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 CLCA2Q9UQC9 943 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 HS3ST3A1Q9Y663 406 aa12.44□□□□□ -0.42
SNHG4-208ENST00000514110 SMG1Q96Q15 3661 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 A6NNZ2 444 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 AP1G1O43747 822 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 PAK4O96013 591 aaPredicted RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 SOX5P35711 763 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 EIF2S3P41091 472 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 ABCG1P45844 678 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 JAM2P57087 298 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 NRG1Q02297 640 aaPredicted RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 KRT31Q15323 416 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 CT47A1Q5JQC4 288 aaPredicted RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 RWDD4Q6NW29 188 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 TMC6Q7Z403 805 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 CCDC185Q8N715 623 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 DCBLD1Q8N8Z6 715 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 OR6K2Q8NGY2 324 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 ISG20Q96AZ6 181 aaKnown RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 PCDHB18PQ96TA0 734 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 OSBPL2Q9H1P3 480 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 FAM207AQ9NSI2 230 aaPredicted RBP12.43□□□□□ -0.42
SNHG4-208ENST00000514110 DNAJC28Q9NX36 388 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 DNAI1Q9UI46 699 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 GGT7Q9UJ14 662 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 NEU3Q9UQ49 428 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 BPTFQ12830 3046 aa12.43□□□□□ -0.42
SNHG4-208ENST00000514110 LY6G6EA0A0G2JKS1 128 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 IGLON5A6NGN9 336 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 BRINP1O60477 761 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 NEBLO76041 1014 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 LRIG2O94898 1065 aa12.42□□□□□ -0.42
SNHG4-208ENST00000514110 MT-CO3P00414 261 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms