RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 IL1BP01584 269 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 NUDT7P0C024 238 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF806P0C7X5 589 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 BCKDHBP21953 392 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 MPLP40238 635 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 MAPK8P45983 427 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 CDH6P55285 790 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 SNRPD1P62314 119 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 ARHGAP8P85298 464 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 LMNB2Q03252 620 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RAD51Q06609 339 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 KRT81Q14533 505 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 IFI16Q16666 785 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 CA9Q16790 459 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 SMTNL2Q2TAL5 461 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 WDR45BQ5MNZ6 344 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 SWT1Q5T5J6 900 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 C11orf63Q6NUN7 778 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 TMCO3Q6UWJ1 677 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 Q6ZVU0 165 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 CYP2U1Q7Z449 544 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 SYT12Q8IV01 421 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF366Q8N895 744 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 OR2AP1Q8NGE2 309 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 OR2A12Q8NGT7 310 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 CEP76Q8TAP6 659 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RLN3Q8WXF3 142 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 HSPH1Q92598 858 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 FAF2Q96CS3 445 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 TOE1Q96GM8 510 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 ZNF599Q96NL3 588 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 CSPG4P5Q96PW8 444 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 FAM129BQ96TA1 746 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 RBCK1Q9BYM8 510 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 NOL6Q9H6R4 1146 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PCDH18Q9HCL0 1135 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 DDX56Q9NY93 547 aaKnown RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 EVLQ9UI08 416 aaPredicted RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 MBD1Q9UIS9 605 aaPredicted RBP8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PCDHA13Q9Y5I0 950 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PLXNA2O75051 1894 aa8.34□□□□□ -1.07
NEDD4-210ENST00000513957 PCDH15Q96QU1 1955 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 NUMA1Q14980 2115 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 LRRC72A6NJI9 287 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 PJA2O43164 708 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 BUB1O43683 1085 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 PRAMEF11O60813 436 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 SEMA4FO95754 770 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 IGSF6O95976 241 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 MT-CO1P00395 513 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 GNSP15586 552 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 CHRNA3P32297 505 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 SLC8A1P32418 973 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 ACVRL1P37023 503 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 HSPA9P38646 679 aaKnown RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 SSR1P43307 286 aaKnown RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 DHPSP49366 369 aaPredicted RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 ARSEP51690 589 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 VAV2P52735 878 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF33AQ06730 810 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 IL10RBQ08334 325 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 DPYSL3Q14195 570 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 MESDQ14696 234 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 CARD16Q5EG05 197 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 KCNT1Q5JUK3 1230 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 NEK5Q6P3R8 708 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 ZNF354CQ86Y25 554 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 MMAAQ8IVH4 418 aaKnown RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 RHOT1Q8IXI2 618 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 STK40Q8N2I9 435 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 BBS5Q8N3I7 341 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 KCTD6Q8NC69 237 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 OR2T34Q8NGX1 318 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 PIP4K2CQ8TBX8 421 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 DNASE2BQ8WZ79 361 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 FATE1Q969F0 183 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 RAB7BQ96AH8 199 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 HMCESQ96FZ2 354 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 BTBD6Q96KE9 485 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 GDAP1L1Q96MZ0 367 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 OMDQ99983 421 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 HEPHQ9BQS7 1158 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 KLC2Q9H0B6 622 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 PDFQ9HBH1 243 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 CAPN10Q9HC96 672 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 DYRK4Q9NR20 520 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 SEMA4GQ9NTN9 838 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 GPATCH2LQ9NWQ4 482 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 FBXL12Q9NXK8 326 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 UBA2Q9UBT2 640 aaPredicted RBP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 IL36AQ9UHA7 158 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.33□□□□□ -1.08
NEDD4-210ENST00000513957 MFHAS1Q9Y4C4 1052 aa8.33□□□□□ -1.08
NEDD4-210ENST00000513957 PCDHB9Q9Y5E1 797 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms