RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ZNF180Q9UJW8 692 aa13.05□□□□□ -0.32
PVT1-203ENST00000513868 REV3LO60673 3130 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 MAGEB16A2A368 324 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 AP3B1O00203 1094 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 LEFTY2O00292 366 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 ATP9BO43861 1147 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 LPXNO60711 386 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 GJB3O75712 270 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 NEBLO76041 1014 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 USP1O94782 785 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 POLBP06746 335 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 RHOP08100 348 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 INHBAP08476 426 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 PBX2P40425 430 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 CD86P42081 329 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 GPM6BQ13491 265 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
PVT1-203ENST00000513868 IL31Q6EBC2 164 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 ALG1LQ6GMV1 187 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 PDE12Q6L8Q7 609 aaKnown RBP13.04□□□□□ -0.32
PVT1-203ENST00000513868 POTEHQ6S545 545 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 SH2D5Q6ZV89 423 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 ADGRD2Q7Z7M1 963 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 BBS7Q8IWZ6 715 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 CTAGE3PQ8IX95 158 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 CPXM2Q8N436 756 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 HJURPQ8NCD3 748 aaPredicted RBP13.04□□□□□ -0.32
PVT1-203ENST00000513868 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 WFDC5Q8TCV5 224 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 NSMCE1Q8WV22 266 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 TMA16Q96EY4 203 aaKnown RBP13.04□□□□□ -0.32
PVT1-203ENST00000513868 GCNAQ96QF7 691 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 KIFC1Q9BW19 673 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 ARNT2Q9HBZ2 717 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 CHRAC1Q9NRG0 131 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 VPS45Q9NRW7 570 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 SAMD15Q9P1V8 674 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 ARHGAP26Q9UNA1 814 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 CCL26Q9Y258 94 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 OR51B4Q9Y5P0 310 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 RPS6KL1Q9Y6S9 549 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 FAM169AQ9Y6X4 670 aa13.04□□□□□ -0.32
PVT1-203ENST00000513868 HMX2A2RU54 273 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ZMPSTE24O75844 475 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 LUC7L3O95232 432 aaKnown RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 CD160O95971 181 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 HNRNPA1P09651 372 aaKnown RBP eCLIP13.03□□□□□ -0.32
PVT1-203ENST00000513868 CHRNA4P43681 627 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 OXCT1P55809 520 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ITKQ08881 620 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 FRG1Q14331 258 aaKnown RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 TEAD2Q15562 447 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ANKRD20A4Q4UJ75 823 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 PRSS36Q5K4E3 855 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 GPR158Q5T848 1215 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 RNF43Q68DV7 783 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ZNF783Q6ZMS7 281 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 MARK2Q7KZI7 788 aaKnown RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 CCDC117Q8IWD4 279 aaPredicted RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 MFSD3Q96ES6 412 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ALG14Q96F25 216 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 ZNF778Q96MU6 729 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 SPON2Q9BUD6 331 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 SLC17A6Q9P2U8 582 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
PVT1-203ENST00000513868 ZNF510Q9Y2H8 683 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 HCFC2Q9Y5Z7 792 aa13.03□□□□□ -0.32
PVT1-203ENST00000513868 SRRM3A6NNA2 597 aaPredicted RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.323e-6■■■□□ 16.4
PVT1-203ENST00000513868 TYROBPO43914 113 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 SPAG7O75391 227 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 FGF19O95750 216 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 NMBRP28336 390 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 MZF1P28698 734 aaPredicted RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 SLC18A1P54219 525 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 NTHL1P78549 312 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 ARF5P84085 180 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 KDELC2Q7Z4H8 507 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 C4orf33Q8N1A6 199 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 CARNMT1Q8N4J0 409 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 DENND1AQ8TEH3 1009 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 ZNF669Q96BR6 464 aaPredicted RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 CERS2Q96G23 380 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 SERAC1Q96JX3 654 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 PSKH2Q96QS6 385 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 SEMA3CQ99985 751 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 MGME1Q9BQP7 344 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 FEM1AQ9BSK4 669 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 FSD1LQ9BXM9 530 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 POLR1EQ9GZS1 481 aaKnown RBP13.02□□□□□ -0.32
PVT1-203ENST00000513868 TASP1Q9H6P5 420 aa13.02□□□□□ -0.32
PVT1-203ENST00000513868 KCNK9Q9NPC2 374 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms