RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 TMEM268Q5VZI3 342 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 FAAH2Q6GMR7 532 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 ZNF813Q6ZN06 617 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 ADGRG6Q86SQ4 1221 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 ADGRG3Q86Y34 549 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 KIF1BPQ96EK5 621 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 MPP4Q96JB8 637 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 PPM1MQ96MI6 270 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 SORCS2Q96PQ0 1159 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 FCRL5Q96RD9 977 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 AGAP2Q99490 1192 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 SYT17Q9BSW7 474 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 NPLQ9BXD5 320 aaPredicted RBP4.57□□□□□ -1.68
HTT-210ENST00000512909 ABHD16BQ9H3Z7 469 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 ACAD9Q9H845 621 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 JMJD4Q9H9V9 463 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 MTMR4Q9NYA4 1195 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 PDP2Q9P2J9 529 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 SERGEFQ9UGK8 458 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 THSD7AQ9UPZ6 1657 aa4.57□□□□□ -1.68
HTT-210ENST00000512909 MEGF6O75095 1541 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 COL18A1P39060 1754 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 IGSF1Q8N6C5 1336 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 MON2Q7Z3U7 1717 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 CRYBG1Q9Y4K1 1723 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 A6NLC8 198 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 AKAP8O43823 692 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 KAT7O95251 611 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 PLAUP00749 431 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 CSF1P09603 554 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 HNRNPA1P09651 372 aaKnown RBP eCLIP4.56□□□□□ -1.68
HTT-210ENST00000512909 RPS6KB1P23443 525 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 CD38P28907 300 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 ZNF84P51523 738 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 DMWDQ09019 674 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 ITPK1Q13572 414 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 ALG10Q5BKT4 473 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 ALG10BQ5I7T1 473 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 KIAA1324Q6UXG2 1013 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 RBM44Q6ZP01 1051 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 ZNF788Q6ZQV5 615 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 RSRC2Q7L4I2 434 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 NGEFQ8N5V2 710 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 DPP10Q8N608 796 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 SEMA6DQ8NFY4 1073 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 PRSS3P2Q8NHM4 247 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.56□□□□□ -1.68
HTT-210ENST00000512909 PNNQ9H307 717 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 MROH8Q9H579 483 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 MIS18AQ9NYP9 233 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 LAS1LQ9Y4W2 734 aaKnown RBP4.56□□□□□ -1.68
HTT-210ENST00000512909 AFG3L2Q9Y4W6 797 aa4.56□□□□□ -1.68
HTT-210ENST00000512909 RGPD1P0DJD0 1748 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 MAPK8IP3Q9UPT6 1336 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 LRRC3CA6NJW4 275 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 F8W810 466 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 IL1AP01583 271 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SLPIP03973 132 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 TUBB4AP04350 444 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 ACP5P13686 325 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 IGFBP2P18065 325 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SFPQP23246 707 aaKnown RBP eCLIP4.55□□□□□ -1.68
HTT-210ENST00000512909 PRPH2P23942 346 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 ADPRHP54922 357 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 RPS13P62277 151 aaKnown RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 YPEL5P62699 121 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 FOXF2Q12947 444 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 FOXD4Q12950 439 aaPredicted RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 BYSLQ13895 437 aaKnown RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 WDR43Q15061 677 aaKnown RBP eCLIP4.55□□□□□ -1.68
HTT-210ENST00000512909 SRSF7Q16629 238 aaKnown RBP eCLIP4.55□□□□□ -1.68
HTT-210ENST00000512909 WDR45BQ5MNZ6 344 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 ZNF362Q5T0B9 420 aaPredicted RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 INTS11Q5TA45 600 aaKnown RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 FAM171A1Q5VUB5 890 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 TTLL5Q6EMB2 1281 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 RETSATQ6NUM9 610 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SLC30A9Q6PML9 568 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 ZNF793Q6ZN11 406 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 MCM10Q7L590 875 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 RRM2BQ7LG56 351 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 MAATS1Q7Z4T9 603 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 GALNT7Q86SF2 657 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 BRSK2Q8IWQ3 736 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SCN4BQ8IWT1 228 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 DNAJC10Q8IXB1 793 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 ADGRF3Q8IZF5 1079 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 DNAAF1Q8NEP3 725 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 TNIP2Q8NFZ5 429 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 HERVK_113Q902F9 699 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 MASTLQ96GX5 879 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 CRAMP1Q96RY5 1269 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 NPAS1Q99742 590 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SCNM1Q9BWG6 230 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 HDHD5Q9BXW7 423 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 SEMA4CQ9C0C4 833 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 TAOK3Q9H2K8 898 aa4.55□□□□□ -1.68
HTT-210ENST00000512909 STN1Q9H668 368 aaKnown RBP4.55□□□□□ -1.68
HTT-210ENST00000512909 TTC12Q9H892 705 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms