RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SLCO6A1Q86UG4 719 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 CHSY1Q86X52 802 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 ARHGEF19Q8IW93 802 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 TRIM59Q8IWR1 403 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 TRIM42Q8IWZ5 723 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 LGI2Q8N0V4 545 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 OR2T34Q8NGX1 318 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 BAHD1Q8TBE0 780 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 WFDC5Q8TCV5 224 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 LMLNQ96KR4 655 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 BTN2A3PQ96KV6 586 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 PRICKLE1Q96MT3 831 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 NOX5Q96PH1 765 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 ZSWIM1Q9BR11 485 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 INTS2Q9H0H0 1204 aaKnown RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 UBE2TQ9NPD8 197 aaPredicted RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.41□□□□□ -1.22
USP46-208ENST00000512656 ADAMTS1Q9UHI8 967 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 FZD4Q9ULV1 537 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 CTNND2Q9UQB3 1225 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 ERVW-1Q9UQF0 538 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 NAALADL1Q9UQQ1 740 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 KNTC1P50748 2209 aa7.41□□□□□ -1.22
USP46-208ENST00000512656 GOLGA4Q13439 2230 aaKnown RBP7.41□□□□□ -1.22
USP46-208ENST00000512656 NUMA1Q14980 2115 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 LAMA5O15230 3695 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 A0A1W2PPC4 97 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 KCNU1A8MYU2 1149 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 E5RJQ4 531 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 H0Y8X5 98 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 VILLO15195 856 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 MID1O15344 667 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 PAPSS1O43252 624 aaPredicted RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 TRUB2O95900 331 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 TGFB1P01137 390 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 FYNP06241 537 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 IGHV4-34P06331 123 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 ATXN1LP0C7T5 689 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 CDK4P11802 303 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 GOT1P17174 413 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 TACR2P21452 398 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 C5AR1P21730 350 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 GNA15P30679 374 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 CCR1P32246 355 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 NUDT1P36639 197 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 PREPP48147 710 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 GALCP54803 685 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 ELAVL3Q14576 367 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 EFHC1Q5JVL4 640 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 C9orf64Q5T6V5 341 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 RAP1GAP2Q684P5 730 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 DENND1BQ6P3S1 775 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 NCEH1Q6PIU2 408 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 BEND4Q6ZU67 534 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 SND1Q7KZF4 910 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP46-208ENST00000512656 TMPRSS7Q7RTY8 843 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 TAC4Q86UU9 113 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 MMAAQ8IVH4 418 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 DHX40Q8IX18 779 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 CFAP52Q8N1V2 620 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 ZNF606Q8WXB4 792 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 RNF34Q969K3 372 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 MRGPRX3Q96LB0 322 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 KREMEN1Q96MU8 473 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 SRRTQ9BXP5 876 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 FAM204AQ9H8W3 233 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 AASDHPPTQ9NRN7 309 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 EGFL7Q9UHF1 273 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 RALYQ9UKM9 306 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 INTS6Q9UL03 887 aaKnown RBP7.4□□□□□ -1.22
USP46-208ENST00000512656 ITIH6Q6UXX5 1313 aa7.4□□□□□ -1.22
USP46-208ENST00000512656 GCN1Q92616 2671 aaKnown RBP7.4□□□□□ -1.23
USP46-208ENST00000512656 WDFY3Q8IZQ1 3526 aa7.4□□□□□ -1.23
USP46-208ENST00000512656 A0A1B0GTQ1 180 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 A0A1B0GVM2 712 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 A0A1W2PP55 124 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 HMX2A2RU54 273 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 TCAF2A6NFQ2 919 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 TTC34A8MYJ7 566 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 E9PAM4 449 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 BIN1O00499 593 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 MAGEC1O60732 1142 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 HSF2BPO75031 334 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 CALCAP01258 141 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 IL1BP01584 269 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 CAPNS1P04632 268 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 C1SP09871 688 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 CD38P28907 300 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 USP8P40818 1118 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 PSMD8P48556 350 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 ARRB1P49407 418 aaPredicted RBP7.39□□□□□ -1.23
USP46-208ENST00000512656 PLK1P53350 603 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 STX17P56962 302 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 CCDC15Q0P6D6 951 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 PDCLQ13371 301 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 FSCBQ5H9T9 825 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 FAM46CQ5VWP2 391 aa7.39□□□□□ -1.23
USP46-208ENST00000512656 SYPL2Q5VXT5 272 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms