RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 ST14Q9Y5Y6 855 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 PTPRMP28827 1452 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 CCDC187A0A096LP49 1063 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 DCDC2BA2VCK2 349 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM170BA6NMN3 283 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 HAX1O00165 279 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC16A3O15427 465 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZSCAN9O15535 394 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MAOBP27338 520 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MAP4P27816 1152 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MSX1P28360 303 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SERPINA4P29622 427 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRKAR2BP31323 418 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SFNP31947 248 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 GABRB2P47870 512 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 CCT8P50990 548 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TIRAPP58753 221 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZNF273Q14593 569 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 EMC10Q5UCC4 262 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZDHHC24Q6UX98 284 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 DENND6AQ8IWF6 608 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 L3MBTL4Q8NA19 623 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TMEM116Q8NCL8 245 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 WDR48Q8TAF3 677 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC22A8Q8TCC7 542 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TMCO6Q96DC7 493 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 SAT2Q96F10 170 aaPredicted RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 FBXL20Q96IG2 436 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 TUBGCP5Q96RT8 1024 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 USP28Q96RU2 1077 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 RMND5AQ9H871 391 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGEF3Q9NR81 526 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ITGA11Q9UKX5 1188 aa6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPS2Q9Y399 296 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 CFAP20Q9Y6A4 193 aaKnown RBP6.42□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 LDLRAD4O15165 306 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 GSTA4O15217 222 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 KLHL2O95198 593 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 PCDH8O95206 1070 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM58BPP0C7Q3 252 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 HOXD8P13378 290 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 POU2F1P14859 743 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SAT1P21673 171 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRKACBP22694 351 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ADRA1DP25100 572 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 PSMA5P28066 241 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 PCSK1P29120 753 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 CORO1AP31146 461 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC11A1P49279 550 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MFAP4P55083 255 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ASIC1P78348 528 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MRPS15P82914 257 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 OTUD4Q01804 1114 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 CAMK1Q14012 370 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGAP19Q14CB8 494 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC9B1Q4ZJI4 515 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGAP40Q5TG30 622 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 RINT1Q6NUQ1 792 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 AFTPHQ6ULP2 937 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MCEMP1Q8IX19 187 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SYT2Q8N9I0 419 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZNF384Q8TF68 577 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 LIPHQ8WWY8 451 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SGK3Q96BR1 496 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 C11orf24Q96F05 449 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 GAL3ST4Q96RP7 486 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 MTRQ99707 1265 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 EIF2AQ9BY44 585 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 METTL7AQ9H8H3 244 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 GPRC5DQ9NZD1 345 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 CNOT7Q9UIV1 285 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 KCNH3Q9ULD8 1083 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ARHGAP23Q9P227 1491 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 YTHDC2Q9H6S0 1430 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 COL15A1P39059 1388 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLIT1O75093 1534 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 C15orf38-AP3S2A0A0A6YYH1 394 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 RAB27BO00194 218 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC16A6O15403 523 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NUDT21O43809 227 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 B4GALT4O60513 344 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 GNA14O95837 355 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 EIF2S1P05198 315 aaKnown RBP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ABHD2P08910 425 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 GABRB1P18505 474 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ITIH2P19823 946 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 RFC2P35250 354 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 TXKP42681 527 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 CAPZA1P52907 286 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NPEPPSP55786 919 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 UCP2P55851 309 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 OVGP1Q12889 678 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 XRCC4Q13426 336 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLBPQ14493 270 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZMYND11Q15326 602 aa6.41□□□□□ -1.38
TRAPPC11-209ENST00000512476 NTRK2Q16620 822 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms