RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 SLC7A4O43246 635 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 RASA4O43374 803 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 BUB1O43683 1085 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 KDELR3O43731 214 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 PRPSAP2O60256 369 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 RNGTTO60942 597 aaKnown RBP13.53□□□□□ -0.24
RNF4-215ENST00000511843 RNF8O76064 485 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 TMCC1O94876 653 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 CER1O95813 267 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 PRNPP04156 253 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 CEACAM1P13688 526 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 PRLRP16471 622 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 IL1R2P27930 398 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 AIF1P55008 147 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 SLC20A2Q08357 652 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 TEAD4Q15561 434 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 SMTNL2Q2TAL5 461 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 PPP6R3Q5H9R7 873 aaPredicted RBP13.53□□□□□ -0.24
RNF4-215ENST00000511843 ERMARDQ5T6L9 678 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 PCDH20Q8N6Y1 951 aaKnown RBP13.53□□□□□ -0.24
RNF4-215ENST00000511843 TRIM11Q96F44 468 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 CEP44Q9C0F1 390 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 CATSPERBQ9H7T0 1116 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 OSGEPQ9NPF4 335 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 TM7SF3Q9NS93 570 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 HPCAL4Q9UM19 191 aa13.53□□□□□ -0.24
RNF4-215ENST00000511843 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
RNF4-215ENST00000511843 A0A1W2PR77 199 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 WASH4PA8MWX3 477 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 KRIT1O00522 736 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 LATO43561 262 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 MYBL1P10243 752 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 SPINK2P20155 84 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 PMLP29590 882 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 EIF4A3P38919 411 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 RACK1P63244 317 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 SIM1P81133 766 aaPredicted RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 FOXC1Q12948 553 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 SERINC3Q13530 473 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 LRRC73Q5JTD7 316 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 CCDC122Q5T0U0 273 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 TXNRD3NBQ6F5E7 133 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 ERN2Q76MJ5 926 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 PARS2Q7L3T8 475 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 VPS36Q86VN1 386 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 CPNE8Q86YQ8 564 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 NAXDQ8IW45 347 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 TP53INP2Q8IXH6 220 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 FNIP1Q8TF40 1166 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 SETD7Q8WTS6 366 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 VOPP1Q96AW1 172 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 EXOC2Q96KP1 924 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 HEPHQ9BQS7 1158 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 NUP85Q9BW27 656 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 SLC32A1Q9H598 525 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 ZWILCHQ9H900 591 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 MRPL47Q9HD33 250 aaKnown RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 FZD3Q9NPG1 666 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 DYRK4Q9NR20 520 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 HECAQ9UBI9 543 aaPredicted RBP13.52□□□□□ -0.25
RNF4-215ENST00000511843 BTBD3Q9Y2F9 522 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 MFHAS1Q9Y4C4 1052 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.52□□□□□ -0.25
RNF4-215ENST00000511843 PTPRBP23467 1997 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 SPEGQ15772 3267 aa13.52□□□□□ -0.25
RNF4-215ENST00000511843 A0A1W2PQU0 124 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 J3KR12 359 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 VILLO15195 856 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 SLC31A1O15431 190 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 FGF10O15520 208 aaPredicted RBP13.51□□□□□ -0.25
RNF4-215ENST00000511843 PCDH8O95206 1070 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 UGT2B4P06133 528 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 TPM3P06753 285 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 CD38P28907 300 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 CTSKP43235 329 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 C21orf59P57076 290 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 SEL1L3Q68CR1 1132 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 SPECC1LQ69YQ0 1117 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 ALKBH5Q6P6C2 394 aaKnown RBP13.51□□□□□ -0.25
RNF4-215ENST00000511843 IL27RAQ6UWB1 636 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 RFX8Q6ZV50 586 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 PRPF39Q86UA1 669 aaKnown RBP13.51□□□□□ -0.25
RNF4-215ENST00000511843 TRIM69Q86WT6 500 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 NPWQ8N729 165 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 OR2AP1Q8NGE2 309 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 HSPH1Q92598 858 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 ISG20Q96AZ6 181 aaKnown RBP13.51□□□□□ -0.25
RNF4-215ENST00000511843 IQCDQ96DY2 449 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 CNTNAP3BQ96NU0 1288 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 PACSIN1Q9BY11 444 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 CNTNAP3Q9BZ76 1288 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 SLC39A8Q9C0K1 460 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 KDM4CQ9H3R0 1056 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 LRRC19Q9H756 370 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 CAAP1Q9H8G2 361 aa13.51□□□□□ -0.25
RNF4-215ENST00000511843 PREBQ9HCU5 417 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms