RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 RASA2Q15283 850 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 HSP90B2PQ58FF3 399 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 DENND2CQ68D51 928 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 TXNDC8Q6A555 127 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ALG1LQ6GMV1 187 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 PARM1Q6UWI2 310 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 TPRG1Q6ZUI0 275 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 DENND1CQ8IV53 801 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 CCDC117Q8IWD4 279 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF567Q8N184 647 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 BBS5Q8N3I7 341 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 TEX26Q8N6G2 289 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 NETO1Q8TDF5 533 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 FAM3CQ92520 227 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 FGF14Q92915 247 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 SMARCD2Q92925 531 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 IGSF8Q969P0 613 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 PRICKLE1Q96MT3 831 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 FCRL5Q96RD9 977 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 SH3GL2Q99962 352 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ROPN1BQ9BZX4 212 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 NOL6Q9H6R4 1146 aaKnown RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ROPN1Q9HAT0 212 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 TRPC7Q9HCX4 862 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 VPS45Q9NRW7 570 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 TDP1Q9NUW8 608 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 OBP2AQ9NY56 170 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 DLGAP2Q9P1A6 1054 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 KLHL8Q9P2G9 620 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 DNMT3BQ9UBC3 853 aaKnown RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ATP8A1Q9Y2Q0 1164 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 AAR2Q9Y312 384 aaKnown RBP9.28□□□□□ -0.92
NR1I3-228ENST00000511676 SH3BP1Q9Y3L3 701 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 MFHAS1Q9Y4C4 1052 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 R4GN57 208 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 CFAP54Q96N23 3096 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 OBSL1O75147 1896 aa9.28□□□□□ -0.92
NR1I3-228ENST00000511676 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 A0A1W2PRU2 124 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RASA4BC9J798 803 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 E7EVH7 732 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RIPK2O43353 540 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RASA4O43374 803 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 PRAMEF11O60813 436 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MOSPD3O75425 235 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 AP2A1O95782 977 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CYBBP04839 570 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 IVLP07476 585 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MYL4P12829 197 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 SLC6A4P31645 630 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 PHBP35232 272 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 PAPOLAP51003 745 aaKnown RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CYP4F8P98187 520 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 GNA12Q03113 381 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ZNF177Q13360 481 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CAMK2BQ13554 666 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 PRPSAP1Q14558 356 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 UAP1Q16222 522 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RSPO4Q2I0M5 234 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CCDC38Q502W7 563 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MPPE1Q53F39 396 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ALFQ53S48 1182 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RALGPS1Q5JS13 557 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 GPR158Q5T848 1215 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 NAPEPLDQ6IQ20 393 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ZNF449Q6P9G9 518 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CYS1Q717R9 158 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 PID1Q7Z2X4 250 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 LINC00523Q86TU6 105 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 C11orf74Q86VG3 221 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MFSD6LQ8IWD5 586 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 RIBC1Q8N443 379 aaPredicted RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 SPEM1Q8N4L4 309 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MAB21L3Q8N8X9 362 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ATP11CQ8NB49 1132 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CCDC110Q8TBZ0 833 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ARHGEF2Q92974 986 aaKnown RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 LOXL4Q96JB6 756 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CCDC77Q9BR77 488 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 SLC46A2Q9BY10 475 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 SLC39A8Q9C0K1 460 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CDC42EP4Q9H3Q1 356 aaKnown RBP9.27□□□□□ -0.93
NR1I3-228ENST00000511676 LRRC40Q9H9A6 602 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 TRPV4Q9HBA0 871 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ETNK1Q9HBU6 452 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 OGFRQ9NZT2 677 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 MPP6Q9NZW5 540 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CDH22Q9UJ99 828 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 SNX10Q9Y5X0 201 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 ANAPC1Q9H1A4 1944 aa9.27□□□□□ -0.93
NR1I3-228ENST00000511676 CCDC163A0A0D9SF12 145 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 GOLGA6L10A6NI86 522 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 GOLGA8KD6RF30 607 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 DFFAO00273 331 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 LEFTY2O00292 366 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 LILRB5O75023 590 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 CNTN5O94779 1100 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 TMEM63AO94886 807 aa9.26□□□□□ -0.93
NR1I3-228ENST00000511676 LUC7L3O95232 432 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms