RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 G2E3Q7L622 706 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 CCAR1Q8IX12 1150 aaKnown RBP7.31□□□□□ -1.24
USP53-206ENST00000510737 MSLNLQ96KJ4 702 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 LRRC27Q9C0I9 530 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 A0A1B0GUL6 1792 aa7.31□□□□□ -1.24
USP53-206ENST00000510737 PLXNA1Q9UIW2 1896 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 PRSS44E7EML9 344 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 CNMDO75829 334 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 ZNF853P0CG23 659 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 T-ENOLP0DO92 83 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 ALADP13716 330 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 CSF2RAP15509 400 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 IRX3P78415 501 aaPredicted RBP7.3□□□□□ -1.24
USP53-206ENST00000510737 POLD3Q15054 466 aaPredicted RBP7.3□□□□□ -1.24
USP53-206ENST00000510737 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 ANKRD33Q7Z3H0 272 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 RFX6Q8HWS3 928 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 PRSS33Q8NF86 280 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 IDI2Q9BXS1 227 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 SLCO5A1Q9H2Y9 848 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 TBC1D23Q9NUY8 699 aa7.3□□□□□ -1.24
USP53-206ENST00000510737 PHIPQ8WWQ0 1821 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 A0A087WZ62 844 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 EPOPA6NHQ4 379 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 SLC15A5A6NIM6 579 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 SEPT4O43236 478 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 UGDHO60701 494 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 INMTO95050 263 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 SLC5A1P13866 664 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 ARRB2P32121 409 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 SOX2P48431 317 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 PPIGQ13427 754 aaKnown RBP eCLIP7.29□□□□□ -1.24
USP53-206ENST00000510737 KCNJ12Q14500 433 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 CCDC57Q2TAC2 916 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 MINDY4Q4G0A6 757 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 CAVIN4Q5BKX8 364 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 SNX22Q96L94 193 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 PAGR1Q9BTK6 254 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 CERS4Q9HA82 394 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 DDX4Q9NQI0 724 aaKnown RBP7.29□□□□□ -1.24
USP53-206ENST00000510737 ZNF212Q9UDV6 495 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 TBX21Q9UL17 535 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
USP53-206ENST00000510737 PTPRFP10586 1907 aa7.29□□□□□ -1.24
USP53-206ENST00000510737 TRIOO75962 3097 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 ZNF318Q5VUA4 2279 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 VPS41P49754 854 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 BACE1P56817 501 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 GRB14Q14449 540 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 CNGA3Q16281 694 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 ARHGAP29Q52LW3 1261 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 CCDC30Q5VVM6 783 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 C18orf65Q6ZTR6 163 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 ADHFE1Q8IWW8 467 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 CCDC146Q8IYE0 955 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 TSPYL6Q8N831 410 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 TUBB6Q9BUF5 446 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 OSBPL5Q9H0X9 879 aaPredicted RBP7.28□□□□□ -1.24
USP53-206ENST00000510737 SLC25A32Q9H2D1 315 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 FAM204AQ9H8W3 233 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 PAPOLBQ9NRJ5 636 aaKnown RBP7.28□□□□□ -1.24
USP53-206ENST00000510737 DECR2Q9NUI1 292 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 ASNSD1Q9NWL6 643 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 MYH3P11055 1940 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 PKD1L2Q7Z442 2459 aa7.28□□□□□ -1.24
USP53-206ENST00000510737 A0A0G2JMZ2 1700 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 CACNA1BQ00975 2339 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 MYO15AQ9UKN7 3530 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 LACTBL1A8MY62 500 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 F8W810 466 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 PGK1P00558 417 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 NGFRP08138 427 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 TNFRSF8P28908 595 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 ALDH7A1P49419 539 aaKnown RBP7.27□□□□□ -1.25
USP53-206ENST00000510737 SLC12A2P55011 1212 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 ZXDBP98169 803 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 CCDC174Q6PII3 467 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 CCDC149Q6ZUS6 474 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 B4GALNT4Q76KP1 1039 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 LINS1Q8NG48 757 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 WDR24Q96S15 920 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 AGO2Q9UKV8 859 aaKnown RBP7.27□□□□□ -1.25
USP53-206ENST00000510737 BAHCC1Q9P281 2608 aa7.27□□□□□ -1.25
USP53-206ENST00000510737 TPP1O14773 563 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 DCXO43602 365 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 SYF2O95926 243 aaKnown RBP7.26□□□□□ -1.25
USP53-206ENST00000510737 ARP10275 920 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 IL9P15248 144 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 CDK7P50613 346 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 ZNF84P51523 738 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 P2RX3P56373 397 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 PICALMQ13492 652 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 INPP5JQ15735 1006 aaPredicted RBP7.26□□□□□ -1.25
USP53-206ENST00000510737 LRRC24Q50LG9 513 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 WDR78Q5VTH9 848 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 PSRC1Q6PGN9 363 aaPredicted RBP7.26□□□□□ -1.25
USP53-206ENST00000510737 DCP1BQ8IZD4 617 aaKnown RBP7.26□□□□□ -1.25
USP53-206ENST00000510737 TMEM199Q8N511 208 aa7.26□□□□□ -1.25
USP53-206ENST00000510737 MAGEB6Q8N7X4 407 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms