RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PSMA3P25788 255 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 EEF1DP29692 281 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 PSMC2P35998 433 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ATP6V1E1P36543 226 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 IGHMBP2P38935 993 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 PIK3CAP42336 1068 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RFX2P48378 723 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 LMAN1P49257 510 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CLK1P49759 484 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MMP14P50281 582 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ALDH18A1P54886 795 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ZBED6P86452 979 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 LTBQ06643 244 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NEXNQ0ZGT2 675 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 GPR68Q15743 365 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MAPKAPK3Q16644 382 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 GLIPR1L2Q4G1C9 344 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC184Q52MB2 194 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 LCE1FQ5T754 118 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MAP3K21Q5TCX8 1036 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 FAM205BPQ63HN1 556 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 SULT6B1Q6IMI4 303 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NAA16Q6N069 864 aaPredicted RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NFRKBQ6P4R8 1299 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TMTC3Q6ZXV5 915 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TRAPPC11Q7Z392 1133 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 KRT28Q7Z3Y7 464 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC91Q7Z6B0 441 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CPLX4Q7Z7G2 160 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 PRPF39Q86UA1 669 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RHPN2Q8IUC4 686 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ERC1Q8IUD2 1116 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 LMNTD2Q8IXW0 634 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 KIAA2013Q8IYS2 634 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TAGAPQ8N103 731 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NGEFQ8N5V2 710 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ARL10Q8N8L6 244 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ANKRD52Q8NB46 1076 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CEP70Q8NHQ1 597 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 STT3BQ8TCJ2 826 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NUDCD2Q8WVJ2 157 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 WDR60Q8WVS4 1066 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 OIT3Q8WWZ8 545 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ST8SIA4Q92187 359 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 CPT1BQ92523 772 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 JAKMIP2Q96AA8 810 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ZUFSPQ96AP4 578 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 NSUN4Q96CB9 384 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF653Q96CK0 615 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RRP36Q96EU6 259 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MED30Q96HR3 178 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RADILQ96JH8 1075 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 COG8Q96MW5 612 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RTKNQ9BST9 563 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 DDX23Q9BUQ8 820 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 GPR63Q9BZJ6 419 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 PAIP1Q9H074 479 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RABEP2Q9H5N1 569 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 DBNDD1Q9H9R9 158 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ZCCHC17Q9NP64 241 aaKnown RBP2.57□□□□□ -2
DEPDC1B-204ENST00000509006 RGL1Q9NZL6 768 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TMOD4Q9NZQ9 345 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 MORF4L1Q9UBU8 362 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 ODF2LQ9ULJ1 636 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 SNX8Q9Y5X2 465 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 SNX5Q9Y5X3 404 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 EMSYQ7Z589 1322 aa2.57□□□□□ -2
DEPDC1B-204ENST00000509006 TRIM64A6NGJ6 449 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 TRIM64BA6NI03 449 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 SAC3D1A6NKF1 404 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 AQP12BA6NM10 295 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 TTC34A8MYJ7 566 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 H0YGN5 161 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 ACOT8O14734 319 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 PIP5K1BO14986 540 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 SEPT4O43236 478 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 COQ9O75208 318 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 HMMRO75330 724 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 IFNA2P01563 188 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 ENO1P06733 434 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 ATP5DP30049 168 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 PGM1P36871 562 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 STAT6P42226 847 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CCR9P51686 369 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 NR1H2P55055 460 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 RRP1P56182 461 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 RPL36AP83881 106 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 EGR4Q05215 589 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 NSUN2Q08J23 767 aaKnown RBP eCLIP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 WASHC5Q12768 1159 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 EPS8Q12929 822 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 BAK1Q16611 211 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 CTXN3Q4LDR2 81 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 C6orf10Q5SRN2 563 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 OTUD3Q5T2D3 398 aaPredicted RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 GPATCH4Q5T3I0 446 aaKnown RBP2.56□□□□□ -2
DEPDC1B-204ENST00000509006 MRNIPQ6NTE8 343 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 BBS12Q6ZW61 710 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 RAPH1Q70E73 1250 aa2.56□□□□□ -2
DEPDC1B-204ENST00000509006 TRILQ7L0X0 811 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms