RNA–Protein interactions for RNA: ENST00000508387.5

NR1I3-225, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 634 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-225ENST00000508387 NTAN1Q96AB6 310 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 TTYH3Q9C0H2 523 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 HAUS4Q9H6D7 363 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 FZD10Q9ULW2 581 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 ITM2BQ9Y287 266 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
NR1I3-225ENST00000508387 COL5A1P20908 1838 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 ACACBO00763 2458 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 SPINT1O43278 529 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 PCDHGA12O60330 932 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 RAMP2O60895 175 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 PRNPP04156 253 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 EPHA8P29322 1005 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 ABL2P42684 1182 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 DNAJC3Q13217 504 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 HNRNPDQ14103 355 aaKnown RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 ASIC2Q16515 512 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 CARD16Q5EG05 197 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 LUZP1Q86V48 1076 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 ARFGAP1Q8N6T3 406 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 PCDH20Q8N6Y1 951 aaKnown RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 RTL3Q8N8U3 475 aaKnown RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 TMEM145Q8NBT3 493 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 SAP25Q8TEE9 199 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 HMCESQ96FZ2 354 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 CCDC114Q96M63 670 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 NAT10Q9H0A0 1025 aaKnown RBP13.06□□□□□ -0.32
NR1I3-225ENST00000508387 KDM4CQ9H3R0 1056 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 CBX8Q9HC52 389 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 PREBQ9HCU5 417 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 GDF3Q9NR23 364 aa13.06□□□□□ -0.32
NR1I3-225ENST00000508387 FAM149AA5PLN7 773 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 DDX3XO00571 662 aaKnown RBP eCLIP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 RAD51BO15315 384 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 TMCC1O94876 653 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 DKK1O94907 266 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 PCDH8O95206 1070 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 TRIM16O95361 564 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 ADRB3P13945 408 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 EPHB2P29323 1055 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 GRK6P43250 576 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 RECQLP46063 649 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 MAMLD1Q13495 774 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 POLD3Q15054 466 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 EFHC2Q5JST6 749 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 ACBD5Q5T8D3 534 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 DCUN1D2Q6PH85 259 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 GCNT7Q6ZNI0 430 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 KANSL1Q7Z3B3 1105 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 TMC6Q7Z403 805 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 HORMAD1Q86X24 394 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 ZNF354CQ86Y25 554 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 ZCCHC14Q8WYQ9 949 aaKnown RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 EXOC2Q96KP1 924 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 HEPHQ9BQS7 1158 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 CEP44Q9C0F1 390 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 DYRK4Q9NR20 520 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 APOBEC2Q9Y235 224 aaKnown RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 FARP1Q9Y4F1 1045 aaPredicted RBP13.05□□□□□ -0.32
NR1I3-225ENST00000508387 DMXL2Q8TDJ6 3036 aa13.05□□□□□ -0.32
NR1I3-225ENST00000508387 SMTNL1A8MU46 457 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 INSIG1O15503 277 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 KDELR3O43731 214 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 UGT2B4P06133 528 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 ITGAVP06756 1048 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 TCF4P15884 667 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 ITIH2P19823 946 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 PSMA2P25787 234 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 ITGB7P26010 798 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 L1CAMP32004 1257 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 NEK3P51956 506 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 MAPK8IP2Q13387 824 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 SUZ12Q15022 739 aaKnown RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 TMEM259Q4ZIN3 620 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 SETMARQ53H47 684 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 SFMBT2Q5VUG0 894 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 PLEKHA7Q6IQ23 1121 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 DHRS13Q6UX07 377 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 CYP4V2Q6ZWL3 525 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 SLC22A18ASQ8N1D0 253 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 EID2Q8N6I1 236 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 MFSD2AQ8NA29 543 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 KDF1Q8NAX2 398 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 OR13H1Q8NG92 308 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 CELF6Q96J87 481 aaKnown RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 KCTD15Q96SI1 283 aaPredicted RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 CNPY3Q9BT09 278 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 SNRNP25Q9BV90 132 aaKnown RBP13.04□□□□□ -0.32
NR1I3-225ENST00000508387 HDAC8Q9BY41 377 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 MAGEH1Q9H213 219 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 FTSJ1Q9UET6 329 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 PCSK1NQ9UHG2 260 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 MYO6Q9UM54 1294 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 DMTF1Q9Y222 760 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 FADS3Q9Y5Q0 445 aa13.04□□□□□ -0.32
NR1I3-225ENST00000508387 A0A1W2PQC6 194 aa13.03□□□□□ -0.32
NR1I3-225ENST00000508387 FAM221BA6H8Z2 402 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms