RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KLK6Q92876 244 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 PPP1R16AQ96I34 528 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 DYRK4Q9NR20 520 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 FCF1Q9Y324 198 aaKnown RBP13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 MYLKQ15746 1914 aa13.27□□□□□ -0.29
HMGCS1-205ENST00000508319 CXorf51AA0A1B0GTR3 108 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 TDRD6O60522 2096 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 SDC3O75056 442 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 LRIG2O94898 1065 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 THEGLP0DJG4 465 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 HNRNPA2B1P22626 353 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 ITGB7P26010 798 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 NSFP46459 744 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 MAPKAPK2P49137 400 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 CCNHP51946 323 aaPredicted RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 NEK3P51956 506 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 CLDN6P56747 220 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 MYL5Q02045 173 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 SLC20A2Q08357 652 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 CCDC15Q0P6D6 951 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 CLEC16AQ2KHT3 1053 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 ARL13BQ3SXY8 428 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 SEL1L3Q68CR1 1132 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 MON1BQ7L1V2 547 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 PARS2Q7L3T8 475 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 STRADAQ7RTN6 431 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 APTXQ7Z2E3 356 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 SLC22A18ASQ8N1D0 253 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 FAM172AQ8WUF8 416 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 VOPP1Q96AW1 172 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 KLHDC7BQ96G42 594 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 MAGEB5Q9BZ81 275 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 OSBPL2Q9H1P3 480 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 HSD3B7Q9H2F3 369 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 TMEM248Q9NWD8 314 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 ADAM22Q9P0K1 906 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 LHX6Q9UPM6 363 aa13.26□□□□□ -0.29
HMGCS1-205ENST00000508319 TRABD2BA6NFA1 517 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 PCDH8O95206 1070 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 C1SP09871 688 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 KRT3P12035 628 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 ADRB3P13945 408 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 RHOQP17081 205 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 AKT2P31751 481 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 RFC1P35251 1148 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 ETFBP38117 255 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 STX1AQ16623 288 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 CARD16Q5EG05 197 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 RWDD4Q6NW29 188 aaKnown RBP13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 GCNT7Q6ZNI0 430 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 ABI3BPQ7Z7G0 1075 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 PHF13Q86YI8 300 aaPredicted RBP13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 C3orf20Q8ND61 904 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 OR13H1Q8NG92 308 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 NTAN1Q96AB6 310 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 TBC1D31Q96DN5 1066 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 ERGIC2Q96RQ1 377 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 HEPHQ9BQS7 1158 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 TM6SF2Q9BZW4 377 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 RETREG1Q9H6L5 497 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 GPR27Q9NS67 375 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 ANO10Q9NW15 660 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 DNAI1Q9UI46 699 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 RAXQ9Y2V3 346 aa13.25□□□□□ -0.29
HMGCS1-205ENST00000508319 TCRBV5S1A1TA0A578 114 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 TRIM38O00635 465 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 CALB1P05937 261 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 PLEKP08567 350 aaPredicted RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 CDK4P11802 303 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 GPD1P21695 349 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 L1CAMP32004 1257 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 DNA2P51530 1060 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 CLDN2P57739 230 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 UBXN1Q04323 297 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 CYP4F3Q08477 520 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 FGL2Q14314 439 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 NCAPHQ15003 741 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 PROX2Q3B8N5 592 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 FBXL19Q6PCT2 694 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 SLC25A45Q8N413 288 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 PDCD7Q8N8D1 485 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 OR6K2Q8NGY2 324 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 ARHGEF2Q92974 986 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 ISG20Q96AZ6 181 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 GBP4Q96PP9 640 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 MAGEH1Q9H213 219 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 NOL6Q9H6R4 1146 aaKnown RBP13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 ZDHHC6Q9H6R6 413 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 CAAP1Q9H8G2 361 aa13.24□□□□□ -0.29
HMGCS1-205ENST00000508319 KLHL11Q9NVR0 708 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms