RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 CXorf38Q8TB03 319 aa12.89□□□□□ -0.35
DDR1-262ENST00000508312 NIFKQ9BYG3 293 aaKnown RBP12.89□□□□□ -0.35
DDR1-262ENST00000508312 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
DDR1-262ENST00000508312 MFHAS1Q9Y4C4 1052 aa12.89□□□□□ -0.35
DDR1-262ENST00000508312 EIF3FO00303 357 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 GSRP00390 522 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 RPS12P25398 132 aaKnown RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 ADORA2AP29274 412 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 GTF2A2P52657 109 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 DPYSQ14117 519 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 KIZQ2M2Z5 673 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 CES3Q6UWW8 571 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 LAYNQ6UX15 382 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 RNF19BQ6ZMZ0 732 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 CDH19Q9H159 772 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 TMPRSS4Q9NRS4 437 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SCHIP1Q9P0W5 487 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 COPG2Q9UBF2 871 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 AURKCQ9UQB9 309 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 TCRBV5S1A1TA0A578 114 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SLC15A5A6NIM6 579 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 C3orf70A6NLC5 250 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 FAM47E-STBD1D6RA91 191 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 APOC4-APOC2K7ER74 178 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 PSMD11O00231 422 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 TRDMT1O14717 391 aaKnown RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 APOC2P02655 101 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 HMGCRP04035 888 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 PRKCHP24723 683 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SERPINB9P50453 376 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 NKX2-5P52952 324 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 BFSP2Q13515 415 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 CLPPQ16740 277 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 PHKG1Q16816 387 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 MPZL3Q6UWV2 235 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 ACOT1Q86TX2 421 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SLC4A11Q8NBS3 891 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 NPLQ9BXD5 320 aaPredicted RBP12.88□□□□□ -0.35
DDR1-262ENST00000508312 EFCAB1Q9HAE3 211 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 PALMDQ9NP74 551 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 VTA1Q9NP79 307 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 SPO11Q9Y5K1 396 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 DGKBQ9Y6T7 804 aa12.88□□□□□ -0.35
DDR1-262ENST00000508312 RLFQ13129 1914 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 FAM149AA5PLN7 773 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 H0YCG3 227 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 ZNF195O14628 629 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 KRT75O95678 551 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 ALDOAP04075 364 aaKnown RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 CCNA2P20248 432 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 NDST1P52848 882 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 OAZ1P54368 228 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 ADAM17P78536 824 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 MAPK11Q15759 364 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 KCTD8Q6ZWB6 473 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 BTLAQ7Z6A9 289 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 XYLT1Q86Y38 959 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 APOBEC3FQ8IUX4 373 aaKnown RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 CADM3Q8N126 398 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 RXFP2Q8WXD0 754 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 KLK14Q9P0G3 267 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 ZNF839A8K0R7 811 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 SOCS2O14508 198 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 C1QAP02745 245 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 IGFBP6P24592 240 aaPredicted RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 MPSTP25325 297 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 PGGT1BP53609 377 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 CREB5Q02930 508 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 OLIG2Q13516 323 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 LSM12Q3MHD2 195 aaKnown RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 TIGD2Q4W5G0 525 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 EPGNQ6UW88 154 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 CMC1Q7Z7K0 106 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 CAND1Q86VP6 1230 aaKnown RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 SIX5Q8N196 739 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 PCYOX1LQ8NBM8 494 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 BPIFB6Q8NFQ5 453 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 SGF29Q96ES7 293 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 C12orf42Q96LP6 360 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 PNPLA8Q9NP80 782 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 PCDH12Q9NPG4 1184 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 MKS1Q9NXB0 559 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 RBPJLQ9UBG7 517 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 IGKV6D-21A0A0A0MT36 114 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 CHADO15335 359 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 MYO1DO94832 1006 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 GABRB3P28472 473 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 NUMBP49757 651 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 PTPN11Q06124 597 aaPredicted RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 NFATC3Q12968 1075 aa12.87□□□□□ -0.35
DDR1-262ENST00000508312 VASH1Q7L8A9 365 aaPredicted RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 CTU1Q7Z7A3 348 aaKnown RBP12.87□□□□□ -0.35
DDR1-262ENST00000508312 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms