RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 RPS14P62263 151 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 ARF5P84085 180 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PRR20EP86478 221 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PRR20CP86479 221 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PRR20DP86480 221 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PRR20BP86481 221 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PRR20AP86496 221 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 RPL6Q02878 288 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 SLC25A11Q02978 314 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 PDK2Q15119 407 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 INO80DQ53TQ3 878 aaPredicted RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 CARD16Q5EG05 197 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 SYCP2LQ5T4T6 812 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 TMCO3Q6UWJ1 677 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 LINGO4Q6UY18 593 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 USP30Q70CQ3 517 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 POLNQ7Z5Q5 900 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MMAAQ8IVH4 418 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 TMEFF1Q8IYR6 380 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 STK40Q8N2I9 435 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PCDH20Q8N6Y1 951 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 FRMD1Q8N878 549 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 CADM4Q8NFZ8 388 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 CASKIN2Q8WXE0 1202 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 ANP32BQ92688 251 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 ISG20Q96AZ6 181 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 TOE1Q96GM8 510 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 FAM129BQ96TA1 746 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 OMDQ99983 421 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MAK16Q9BXY0 300 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 CEP44Q9C0F1 390 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 BTBD1Q9H0C5 482 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 MTG2Q9H4K7 406 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PGPEP1Q9NXJ5 209 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 USP36Q9P275 1121 aaKnown RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 RCOR3Q9P2K3 495 aaPredicted RBP7.41□□□□□ -1.22
GYPB-206ENST00000506516 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 NEU3Q9UQ49 428 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 PCDHGA5Q9Y5G8 931 aa7.41□□□□□ -1.22
GYPB-206ENST00000506516 USP34Q70CQ2 3546 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 J3QL48 77 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 K7ERQ8 282 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SMAD6O43541 496 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 SPOPO43791 374 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 NRDCO43847 1150 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 IGLV3-19P01714 112 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 PRNPP04156 253 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 VAV1P15498 845 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 TCF4P15884 667 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 BCKDHBP21953 392 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 AMPD1P23109 780 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SERPINB6P35237 376 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 GJC1P36383 396 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 DHPSP49366 369 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 PAPOLAP51003 745 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 HADHBP55084 474 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 TAS2R40P59535 323 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SNRPD1P62314 119 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 CREB5Q02930 508 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 RAD51Q06609 339 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 ZNF33AQ06730 810 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 KIF5AQ12840 1032 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SERINC3Q13530 473 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 DPYSQ14117 519 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 CST6Q15828 149 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 IFI16Q16666 785 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 LRRC38Q5VT99 294 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 PMS2CLQ68D20 193 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 TXNRD3NBQ6F5E7 133 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 RAD9BQ6WBX8 426 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 Q6ZVU0 165 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 CYP4V2Q6ZWL3 525 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 KIAA1328Q86T90 577 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 CACUL1Q86Y37 369 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 LRRC49Q8IUZ0 686 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 ANKMY2Q8IV38 441 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 RHOT1Q8IXI2 618 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 HDDC3Q8N4P3 179 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 TMIEQ8NEW7 156 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 OR2A12Q8NGT7 310 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 FAM71BQ8TC56 605 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 NSMCE1Q8WV22 266 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 HMCESQ96FZ2 354 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 ZNF419Q96HQ0 510 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 CELF6Q96J87 481 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 CSPG4P5Q96PW8 444 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 CALN1Q9BXU9 219 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SLC39A8Q9C0K1 460 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 ARRDC1-AS1Q9H2J1 176 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 PABPC3Q9H361 631 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 LRRC19Q9H756 370 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 GRPEL1Q9HAV7 217 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 SGK2Q9HBY8 427 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 PCDH18Q9HCL0 1135 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 DYRK4Q9NR20 520 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 TOR4AQ9NXH8 423 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 FBXL12Q9NXK8 326 aa7.4□□□□□ -1.22
GYPB-206ENST00000506516 DDX56Q9NY93 547 aaKnown RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 WSB2Q9NYS7 404 aaPredicted RBP7.4□□□□□ -1.22
GYPB-206ENST00000506516 HECAQ9UBI9 543 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms