RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 CYP4F11Q9HBI6 524 aa13.45□□□□□ -0.26
CCSER1-205ENST00000505073 SPG21Q9NZD8 308 aa13.45□□□□□ -0.26
CCSER1-205ENST00000505073 KLHL8Q9P2G9 620 aaPredicted RBP13.45□□□□□ -0.26
CCSER1-205ENST00000505073 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
CCSER1-205ENST00000505073 VANGL2Q9ULK5 521 aa13.45□□□□□ -0.26
CCSER1-205ENST00000505073 DFFAO00273 331 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TLR5O60602 858 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 OPHN1O60890 802 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 LAG3P18627 525 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 BGNP21810 368 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 CPA2P48052 419 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 MLLT6P55198 1093 aaPredicted RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 AP2B1P63010 937 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 LIN52Q52LA3 116 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 MYLK4Q86YV6 388 aaPredicted RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 HDAC11Q96DB2 347 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 FAM210AQ96ND0 272 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 HERC2P3Q9BVR0 1158 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 PIH1D1Q9NWS0 290 aaKnown RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 RAD54BQ9Y620 910 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TEX264Q9Y6I9 313 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 MT-ND3P03897 115 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 ZDHHC11BP0C7U3 371 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TPSB2P20231 275 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 MX2P20592 715 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 HOXC13P31276 330 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 FDFT1P37268 417 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 CDC16Q13042 620 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 ZBTB17Q13105 803 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TRIP4Q15650 581 aaPredicted RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 ALYREFQ86V81 257 aaKnown RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 ARHGAP12Q8IWW6 846 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 SCUBE1Q8IWY4 988 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TTC17Q96AE7 1141 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 CFAP36Q96G28 342 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 AGAP3Q96P47 875 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 FAM111AQ96PZ2 611 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 PANX3Q96QZ0 392 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 NDNQ99608 321 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 TTLL2Q9BWV7 592 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 UBE2OQ9C0C9 1292 aaKnown RBP13.44□□□□□ -0.26
CCSER1-205ENST00000505073 IL23AQ9NPF7 189 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 PTPRSQ13332 1948 aa13.44□□□□□ -0.26
CCSER1-205ENST00000505073 CAPN14A8MX76 684 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 NCAM2O15394 837 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 TM7SF2O76062 418 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ABLIM3O94929 683 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 APOEP02649 317 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 URODP06132 367 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ACTR3P61158 418 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 MS4A13Q5J8X5 152 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 SDCCAG8Q86SQ7 713 aaPredicted RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 MCUQ8NE86 351 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 USP33Q8TEY7 942 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 CATSPERBQ9H7T0 1116 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 OLA1Q9NTK5 396 aaKnown RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 COMMD8Q9NX08 183 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 PLA2G4CQ9UP65 541 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 FAM237BA0A1B0GVD1 139 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 KLF11O14901 512 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 EFCAB14O75071 495 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ENO1P06733 434 aaKnown RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 PYGLP06737 847 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 SLC2A3P11169 496 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 OLIG2Q13516 323 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ULK2Q8IYT8 1036 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 ZNF512Q96ME7 567 aaPredicted RBP13.43□□□□□ -0.26
CCSER1-205ENST00000505073 SLC39A8Q9C0K1 460 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 KCNK4Q9NYG8 393 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 TBC1D30Q9Y2I9 924 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 YIPF1Q9Y548 306 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 COMMD3-BMI1R4GMX3 469 aa13.43□□□□□ -0.26
CCSER1-205ENST00000505073 IQANK1A0A1B0GTG1 560 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 FGF10O15520 208 aaPredicted RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 JCHAINP01591 159 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 HSPA1AP0DMV8 641 aaKnown RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 HSPA1BP0DMV9 641 aaKnown RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 HMGA1P17096 107 aaKnown RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 EN2P19622 333 aaPredicted RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 CA8P35219 290 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 KCNQ1P51787 676 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 DNAL1Q4LDG9 190 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 RAP1GAP2Q684P5 730 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 MARK2Q7KZI7 788 aaKnown RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 TFAP2DQ7Z6R9 452 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 DDX53Q86TM3 631 aaKnown RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 TREML1Q86YW5 311 aa13.42□□□□□ -0.26
CCSER1-205ENST00000505073 ST13P4Q8IZP2 240 aaPredicted RBP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCSER1-205ENST00000505073 ATP6V0D2Q8N8Y2 350 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms