RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 MYO9BQ13459 2157 aa7.91□□□□□ -1.14
ATP2C1-208ENST00000504948 ITGB3P05106 788 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 TFAP2AP05549 437 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 GSNP06396 782 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 HMBSP08397 361 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CHRM3P20309 590 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ATXN1P54253 815 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SLC18A2Q05940 514 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 UGT2A3Q6UWM9 527 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 GET4Q7L5D6 327 aaPredicted RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SLC41A1Q8IVJ1 513 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 TTC30BQ8N4P2 665 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SLC15A4Q8N697 577 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ENDOVQ8N8Q3 282 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 BANPQ8N9N5 519 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ANKLE1Q8NAG6 615 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 POF1BQ8WVV4 589 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 COPG2Q9UBF2 871 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CLEC4AQ9UMR7 237 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 VPS4AQ9UN37 437 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 LTBP3Q9NS15 1303 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CLPXO76031 633 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ITGB6P18564 788 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 EFNA1P20827 205 aaPredicted RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 PSMB4P28070 264 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 HSPA13P48723 471 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 IDH3AP50213 366 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 IRF9Q00978 393 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 GBE1Q04446 702 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 AP3B2Q13367 1082 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 DUOXA2Q1HG44 320 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 LSM12Q3MHD2 195 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 PAN2Q504Q3 1202 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 DGKKQ5KSL6 1271 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 TRIM72Q6ZMU5 477 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SLFN11Q7Z7L1 901 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 ABRAQ8N0Z2 381 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 VGLL2Q8N8G2 317 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CLIP3Q96DZ5 547 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SMARCAD1Q9H4L7 1026 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 MRPL40Q9NQ50 206 aaKnown RBP7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SYBUQ9NX95 663 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 PCDHGA7Q9Y5G6 932 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 CLUHO75153 1309 aa7.9□□□□□ -1.14
ATP2C1-208ENST00000504948 RRN3P2A6NIE6 340 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ASB14A6NK59 587 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 APBA3O96018 575 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 GJB1P08034 283 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ELK4P28324 431 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 RABGGTBP53611 331 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 CHRNB3Q05901 458 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 CCNIQ14094 377 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 DLGAP5Q15398 846 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ZSWIM7Q19AV6 140 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 FAM219BQ5XKK7 198 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 GHDCQ8N2G8 530 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 C12orf29Q8N999 325 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 OR52K2Q8NGK3 314 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 MCFD2Q8NI22 146 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 SNX19Q92543 992 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ZHX1-C8orf76Q96EF9 292 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 BORCS6Q96GS4 357 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 AGAP2Q99490 1192 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 KCTD14Q9BQ13 255 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 MRPL45Q9BRJ2 306 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 APOL5Q9BWW9 433 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 B3GNT5Q9BYG0 378 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 XPR1Q9UBH6 696 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 SEL1LQ9UBV2 794 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 WDR37Q9Y2I8 494 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 NUP214P35658 2090 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 RGSL1A5PLK6 1076 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 SCAMP3O14828 347 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 PPEF1O14829 653 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 MED7O43513 233 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 MAGEC1O60732 1142 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 PSIP1O75475 530 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 RNASEH2AO75792 299 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 PGLSO95336 258 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 HSPA1AP0DMV8 641 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 HSPA1BP0DMV9 641 aaKnown RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 PRKACGP22612 351 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ATP6V1E1P36543 226 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 KCNK10P57789 538 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ZFP69Q49AA0 526 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 PPP1R26Q5T8A7 1209 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 STYK1Q6J9G0 422 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 EFHBQ8N7U6 833 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 DTX3Q8N9I9 347 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 SHCBP1Q8NEM2 672 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 VTI1AQ96AJ9 217 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 ACE2Q9BYF1 805 aaPredicted RBP7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 POMKQ9H5K3 350 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 RSAD1Q9HA92 442 aa7.9□□□□□ -1.15
ATP2C1-208ENST00000504948 KLHL20Q9Y2M5 609 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms