RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ADRB3P13945 408 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 CMA1P23946 247 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC5A2P31639 672 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 CCR1P32246 355 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PRCPP42785 496 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GPD2P43304 727 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 RABIFP47224 123 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 RPIAP49247 311 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 FMO5P49326 533 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 THOP1P52888 689 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PDX1P52945 283 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PMS1P54277 932 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 YWHAZP63104 245 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 RPS21P63220 83 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 KRT83P78385 493 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 FKBP3Q00688 224 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SGCGQ13326 291 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 AUHQ13825 339 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ARL13BQ3SXY8 428 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC40Q4G0X9 1142 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 TMEM259Q4ZIN3 620 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ALFQ53S48 1182 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ANKRD40Q6AI12 368 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ATL3Q6DD88 541 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 DPY19L3Q6ZPD9 716 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 RAB11FIP2Q7L804 512 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 TFAP2DQ7Z6R9 452 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 B3GNT8Q7Z7M8 397 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 C14orf80Q86SX3 495 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 DCP2Q8IU60 420 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PHACTR4Q8IZ21 702 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 DEFB106AQ8N104 65 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 FBXO39Q8N4B4 442 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 TPCN2Q8NHX9 752 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GLMNQ92990 594 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 NAT6Q93015 286 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GRAMD1AQ96CP6 724 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SGF29Q96ES7 293 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PSMB7Q99436 277 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SPON2Q9BUD6 331 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 LRRC61Q9BV99 259 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 C2orf49Q9BVC5 232 aaPredicted RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SLC17A9Q9BYT1 436 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GTPBP4Q9BZE4 634 aaKnown RBP7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 FOXP3Q9BZS1 431 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 THAP9Q9H5L6 903 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 NCKIPSDQ9NZQ3 722 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SPASTQ9UBP0 616 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 GULP1Q9UBP9 304 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 PISDQ9UG56 409 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 IL36AQ9UHA7 158 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 VPS51Q9UID3 782 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 SALL4Q9UJQ4 1053 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 DOLKQ9UPQ8 538 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 HS3ST2Q9Y278 367 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 ITM2BQ9Y287 266 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 OR51B4Q9Y5P0 310 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 HS3ST4Q9Y661 456 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 HECTD1Q9ULT8 2610 aa7.04□□□□□ -1.28
NPIPB3-203ENST00000504841 A0A0D9SEW6 157 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 IGLON5A6NGN9 336 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 SPINT1O43278 529 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 THAP12O43422 761 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 PAGE1O75459 146 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CLDN11O75508 207 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 GCATO75600 419 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CNTN5O94779 1100 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 RPLP0P05388 317 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 JMJD7P0C870 316 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 MLLT3P42568 568 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 ABL2P42684 1182 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 ADKP55263 362 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CDH4P55283 916 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CYP4F2P78329 520 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 LSM11P83369 360 aaKnown RBP eCLIP7.03□□□□□ -1.285e-8■□□□□ 11.1
NPIPB3-203ENST00000504841 EIF2B5Q13144 721 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 PDCLQ13371 301 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 PNOCQ13519 176 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 MANEAQ5SRI9 462 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 FAXCQ5TGI0 409 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 KIAA1161Q6NSJ0 714 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 ESRP1Q6NXG1 681 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 ZNF574Q6ZN55 896 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 PARS2Q7L3T8 475 aaKnown RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 BEND5Q7L4P6 421 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 VPS36Q86VN1 386 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 PASD1Q8IV76 773 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 SPNS2Q8IVW8 549 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 SDR16C5Q8N3Y7 309 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 RYBPQ8N488 228 aaPredicted RBP7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 DCAF4L2Q8NA75 395 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 TMIEQ8NEW7 156 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 OR7D4Q8NG98 312 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 OR6K2Q8NGY2 324 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 FAM174AQ8TBP5 190 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 CCDC74AQ96AQ1 378 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 FEM1CQ96JP0 617 aa7.03□□□□□ -1.28
NPIPB3-203ENST00000504841 MED15Q96RN5 788 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms