RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ANKRD20A4Q4UJ75 823 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 ATXN2LQ8WWM7 1075 aaKnown RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 CATSPERZQ9NTU4 200 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 CYBAP13498 195 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 MZF1P28698 734 aaPredicted RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 VEGFBP49765 207 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 BST1Q10588 318 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 MTFR1Q15390 333 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 DNAL1Q4LDG9 190 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 MARCH8Q5T0T0 291 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 TRMT10BQ6PF06 316 aaKnown RBP14.27□□□□□ -0.12
TCOF1-207ENST00000504761 PACS1Q6VY07 963 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 HMCESQ96FZ2 354 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 OSGEPL1Q9H4B0 414 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 CCSER2Q9H7U1 834 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 THAP1Q9NVV9 213 aa14.27□□□□□ -0.12
TCOF1-207ENST00000504761 FAM237BA0A1B0GVD1 139 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ZBTB42B2RXF5 422 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 FCHO1O14526 889 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 IRAK2O43187 625 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PTPN3P26045 913 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 SCARA3Q6AZY7 606 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 CNPY4Q8N129 248 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 HJURPQ8NCD3 748 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-207ENST00000504761 OR52K2Q8NGK3 314 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ING5Q8WYH8 240 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ZNF333Q96JL9 665 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ABCG8Q9H221 673 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ASB8Q9H765 288 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PCDHGC4Q9Y5F7 938 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 C1orf232A0A0U1RR37 186 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PTGESO14684 152 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 SYNCRIPO60506 623 aaKnown RBP14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PIGNO95427 931 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 LMNAP02545 664 aaKnown RBP14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ZNF7P17097 686 aaPredicted RBP14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PROZP22891 400 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ZNF132P52740 706 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 TCEA2Q15560 299 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PTPRNQ16849 979 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 SPOCK2Q92563 424 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC126Q96EE4 140 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 SLC39A8Q9C0K1 460 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 ZDHHC18Q9NUE0 388 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 TMEM59LQ9UK28 342 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 PCDHGB4Q9UN71 923 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 CPQQ9Y646 472 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 CITO14578 2027 aa14.27□□□□□ -0.13
TCOF1-207ENST00000504761 TRPC5OSA6NMA1 111 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 NEDD8-MDP1E9PL57 170 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 F7P08709 466 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 SMARCB1Q12824 385 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 TMEM259Q4ZIN3 620 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 FNDC3BQ53EP0 1204 aaKnown RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 LRRC49Q8IUZ0 686 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CATSPER2Q96P56 530 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 MYH7BA7E2Y1 1941 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 SLC38A8A6NNN8 435 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 SNX3O60493 162 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 RHOQP17081 205 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CRABP2P29373 138 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CHRNA4P43681 627 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 ACOX2Q99424 681 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 SPATA16Q9BXB7 569 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 TCF7L2Q9NQB0 619 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 TTC24A2A3L6 582 aaPredicted RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 ACSL4O60488 711 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CCNT2O60583 730 aaKnown RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CLASP2O75122 1294 aaKnown RBP14.26□□□□□ -0.13
TCOF1-207ENST00000504761 HSPA14Q0VDF9 509 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 ACOX1Q15067 660 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 PPM1JQ5JR12 505 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 ICA1LQ8NDH6 482 aa14.26□□□□□ -0.13
TCOF1-207ENST00000504761 C5orf60A6NFR6 353 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 GNRH1P01148 92 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 EEF1B2P24534 225 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 PFKFB4Q16877 469 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 LRRC8BQ6P9F7 803 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ZNF572Q7Z3I7 529 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 AZIN2Q96A70 460 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 FUBP3Q96I24 572 aaKnown RBP eCLIP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SLC9A7Q96T83 725 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SNX15Q9NRS6 342 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 DCXO43602 365 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 TPST1O60507 370 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SH3BGRLO75368 114 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 CLDN11O75508 207 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 TMCC1O94876 653 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ATP5BP06576 529 aaKnown RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 KCNQ1P51787 676 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 CYP4F8P98187 520 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 SLC1A5Q15758 541 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 DET1Q7L5Y6 550 aa14.25□□□□□ -0.13
TCOF1-207ENST00000504761 ST13P5Q8NFI4 369 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-207ENST00000504761 RPL10LQ96L21 214 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms