RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 MTA1Q13330 715 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 MEA1Q16626 185 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 ZNF542PQ5EBM4 170 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 TTC39BQ5VTQ0 682 aaPredicted RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 SYPL2Q5VXT5 272 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 PTAR1Q7Z6K3 402 aaPredicted RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 SLC25A45Q8N413 288 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 ATP6V0D2Q8N8Y2 350 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 MAPK15Q8TD08 544 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 SLC39A13Q96H72 371 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 VCPIP1Q96JH7 1222 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 APOLD1Q96LR9 279 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 RPRD1AQ96P16 312 aaPredicted RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 ZCCHC2Q9C0B9 1178 aaKnown RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 MUC3BQ9H195 1237 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 CLMPQ9H6B4 373 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 SYNDIG1Q9H7V2 258 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 POLR1BQ9H9Y6 1135 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 METTL14Q9HCE5 456 aaKnown RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 PREBQ9HCU5 417 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 NDFIP2Q9NV92 336 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 DNAJC28Q9NX36 388 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 ZDHHC3Q9NYG2 299 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 VPS28Q9UK41 221 aa9.3□□□□□ -0.92
DHFR-202ENST00000504396 ATXN7L1Q9ULK2 861 aaPredicted RBP9.3□□□□□ -0.92
DHFR-202ENST00000504396 TCAF2A6NFQ2 919 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 NEMP2A6NFY4 417 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 P4HA2O15460 535 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 SLC28A2O43868 658 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 PCDH8O95206 1070 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 TRUB2O95900 331 aaKnown RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 FYNP06241 537 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CKMT1AP12532 417 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 KRT10P13645 584 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 NOS2P35228 1153 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 ACADSBP45954 432 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 RPL34P49207 117 aaKnown RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 DUSP3P51452 185 aaPredicted RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 PLK1P53350 603 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CLDN2P57739 230 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 LRRC63Q05C16 580 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CCDC15Q0P6D6 951 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CETN1Q12798 172 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 DLG2Q15700 870 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CCDC40Q4G0X9 1142 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 RRAGAQ7L523 313 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 OR13H1Q8NG92 308 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 IFI44Q8TCB0 444 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 STK32AQ8WU08 396 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 FRS2Q8WU20 508 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 ERCC4Q92889 916 aaPredicted RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 KAT5Q92993 513 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 SLC35C1Q96A29 364 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 WBP1Q96G27 269 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 CCDC114Q96M63 670 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 GSDMAQ96QA5 445 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 ZSWIM1Q9BR11 485 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 SEMA4CQ9C0C4 833 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 SCAND2PQ9GZW5 306 aaPredicted RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 TSPAN10Q9H1Z9 355 aaPredicted RBP9.29□□□□□ -0.92
DHFR-202ENST00000504396 POPDC2Q9HBU9 364 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 KLHL11Q9NVR0 708 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 ZNF232Q9UNY5 417 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 SATB2Q9UPW6 733 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 ATP6V1DQ9Y5K8 247 aa9.29□□□□□ -0.92
DHFR-202ENST00000504396 TDRD6O60522 2096 aaKnown RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 ASH1LQ9NR48 2969 aaKnown RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 CPED1A4D0V7 1026 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 TRIM49BA6NDI0 452 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 KCNU1A8MYU2 1149 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 B8ZZF3 427 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 E5RJQ4 531 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 RNF225M0QZC1 329 aaPredicted RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 PIAS2O75928 621 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 NEBLO76041 1014 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ZNF202O95125 648 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 SLC2A3P11169 496 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 C6P13671 934 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 HNRNPA2B1P22626 353 aaKnown RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 PRCPP42785 496 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 LSSP48449 732 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 FMO5P49326 533 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ERVPABLB-1P60509 514 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 GCNT1Q02742 428 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ZNF177Q13360 481 aaPredicted RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 PNOCQ13519 176 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 CDKN3Q16667 212 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ZSCAN23Q3MJ62 389 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ZNF658Q5TYW1 1059 aaPredicted RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 CDCP2Q5VXM1 449 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 KIAA1614Q5VZ46 1190 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 OR6B2Q6IFH4 312 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 CXorf57Q6NSI4 855 aaKnown RBP9.28□□□□□ -0.92
DHFR-202ENST00000504396 NEK5Q6P3R8 708 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 FIGNL1Q6PIW4 674 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 CRTC1Q6UUV9 634 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 NLRP8Q86W28 1048 aa9.28□□□□□ -0.92
DHFR-202ENST00000504396 ATP11CQ8NB49 1132 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms