RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 ZNF69Q9UC07 566 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 FBXO4Q9UKT5 387 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ISY1Q9ULR0 285 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 NFU1Q9UMS0 254 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 MAN2B2Q9Y2E5 1009 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZBTB1Q9Y2K1 713 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 KIF3AQ9Y496 699 aa2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 DHX29Q7Z478 1369 aaKnown RBP2.21□□□□□ -2.06
HMGB3P17-201ENST00000504195 CYP3A7-CYP3A51PA0A087WV96 503 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRBV5-7A0A0A0MS05 114 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC189A1A4V9 331 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM234BA2RU67 622 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 VGLL3A8MV65 326 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 M0QYT0 321 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TULP2O00295 520 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 E2F6O75461 281 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TPPPO94811 219 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CER1O95813 267 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CYP3A4P08684 503 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 MYZAPP0CAP1 466 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF12P17014 697 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CYP3A7P24462 503 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 KLRC2P26717 231 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 AVPR1AP37288 418 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CASP2P42575 452 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 AMTP48728 403 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CASP5P51878 434 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 NUDT6P53370 316 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 NAP1L1P55209 391 aaKnown RBP2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 RPL15P61313 204 aaKnown RBP2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARL13BQ3SXY8 428 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF569Q5MCW4 686 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 HEPHL1Q6MZM0 1159 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 ANKS1BQ7Z6G8 1248 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 C14orf80Q86SX3 495 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 EXOC3L1Q86VI1 746 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 IQCF2Q8IXL9 164 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 LYG1Q8N1E2 194 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TCP11L2Q8N4U5 519 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 NGEFQ8N5V2 710 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 LRRC57Q8N9N7 239 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 GLIS1Q8NBF1 620 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D22AQ8WUA7 517 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 HDAC7Q8WUI4 952 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 WDR60Q8WVS4 1066 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMED6Q8WW62 240 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 PPM1EQ8WY54 764 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TEKT1Q969V4 418 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 REXO5Q96IC2 774 aaKnown RBP2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 FIZ1Q96SL8 496 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 LZTS2Q9BRK4 669 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM120AQ9BXJ8 343 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 KLHL31Q9H511 634 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CXorf56Q9H5V9 222 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRPV5Q9NQA5 729 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 CPSF2Q9P2I0 782 aaKnown RBP2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC12A4Q9UP95 1085 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 RAP2CQ9Y3L5 183 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 DTNAQ9Y4J8 743 aa2.2□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3DA0A087WVF3 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3IA0A087WXS9 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3EA0A087X179 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3KA0A087X1G2 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 LOC105369274A0A096LPK9 316 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 LOC102723532A0A0G2JNH3 316 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3BA6NDS4 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3FA6NER0 549 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM110-MUSTN1A8MSY1 372 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM25EA8MYX2 175 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3LB9A6J9 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CHL1O00533 1208 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 PRC1O43663 620 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 MTA2O94776 668 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 NTSR2O95665 410 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 GLP2RO95838 553 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3HP0C7X1 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC5A1P13866 664 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 NAGAP17050 411 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 GNLYP22749 145 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 PSMA3P25788 255 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CLK1P49759 484 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CYP2J2P51589 502 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF132P52740 706 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBX4P57082 545 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMPRSS3P57727 454 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 FOXL2P58012 376 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TUBA1BP68363 451 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 RBM6P78332 1123 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 IFIT5Q13325 482 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 HNF4GQ14541 408 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 KCTD2Q14681 263 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 PDCD2Q16342 344 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC158Q5M9N0 1113 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARL6IP4Q66PJ3 421 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3GQ6DHY5 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TBC1D3CQ6IPX1 549 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRABD2AQ86V40 505 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 DGKHQ86XP1 1220 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 FMNL3Q8IVF7 1028 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 HSCBQ8IWL3 235 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms