RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 EFHC2Q5JST6 749 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 TCTN3Q6NUS6 607 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 MSANTD2Q6P1R3 559 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 C16orf46Q6P387 395 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 ERN2Q76MJ5 926 aaKnown RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 CCDC13Q8IYE1 715 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 LGI2Q8N0V4 545 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 RCBTB1Q8NDN9 531 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 SCG3Q8WXD2 468 aaKnown RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 TAF4BQ92750 862 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 RNF34Q969K3 372 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 MARVELD3Q96A59 401 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 TBATAQ96M53 351 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 IPO9Q96P70 1041 aaKnown RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 TAAR9Q96RI9 348 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 KLF6Q99612 283 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 AKAP7Q9P0M2 348 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 ERRFI1Q9UJM3 462 aaPredicted RBP12.81□□□□□ -0.36
LSM6-204ENST00000504181 GPR34Q9UPC5 381 aa12.81□□□□□ -0.36
LSM6-204ENST00000504181 ARHGAP10A1A4S6 786 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 MKRN2OSH3BPM6 223 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 EIF3DO15371 548 aaKnown RBP eCLIP12.8□□□□□ -0.36
LSM6-204ENST00000504181 CAPN5O15484 640 aaPredicted RBP12.8□□□□□ -0.36
LSM6-204ENST00000504181 EXOC3O60645 756 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
LSM6-204ENST00000504181 CHRNA3P32297 505 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 PFN3P60673 137 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 SLC12A1Q13621 1099 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 KIAA1161Q6NSJ0 714 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 CIR1Q86X95 450 aaPredicted RBP12.8□□□□□ -0.36
LSM6-204ENST00000504181 ZNF507Q8TCN5 953 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 TATDN2Q93075 761 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 LRRC4Q9HBW1 653 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 B3GALT1Q9Y5Z6 326 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 DCHS2Q6V1P9 2916 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 PCSK5Q92824 1860 aa12.8□□□□□ -0.36
LSM6-204ENST00000504181 CCDC168Q8NDH2 2452 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 A0A1B0GTL3 188 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 M0QYT0 321 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 DIAPH2O60879 1101 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 RPN1P04843 607 aaKnown RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 FGF3P11487 239 aaPredicted RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 SLC8A3P57103 927 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 CLDN10P78369 228 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 ELOCQ15369 112 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 ZACNQ401N2 412 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 RAP1GAP2Q684P5 730 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 TIPARPQ7Z3E1 657 aaKnown RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 SPRED1Q7Z699 444 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 CHSY1Q86X52 802 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 UNC5BQ8IZJ1 945 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 SLC34A3Q8N130 599 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 SIX6OS1Q8N1H7 587 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 SH2D3CQ8N5H7 860 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 OR6C4Q8NGE1 309 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 GRIN3AQ8TCU5 1115 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 FEM1CQ96JP0 617 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 FCRL2Q96LA5 508 aaPredicted RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 UNKQ9C0B0 810 aaKnown RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 DNAI2Q9GZS0 605 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 CYP3A43Q9HB55 503 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 RDH14Q9HBH5 336 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 XPO7Q9UIA9 1087 aaKnown RBP12.79□□□□□ -0.36
LSM6-204ENST00000504181 MAP4K5Q9Y4K4 846 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 KCNMB2Q9Y691 235 aa12.79□□□□□ -0.36
LSM6-204ENST00000504181 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 XPO1O14980 1071 aaKnown RBP12.78□□□□□ -0.36
LSM6-204ENST00000504181 STAT6P42226 847 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 NUCB2P80303 420 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 PPARDQ03181 441 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 SGCGQ13326 291 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 CCAR2Q8N163 923 aaKnown RBP12.78□□□□□ -0.36
LSM6-204ENST00000504181 FSTL5Q8N475 847 aaPredicted RBP12.78□□□□□ -0.36
LSM6-204ENST00000504181 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 CHST14Q8NCH0 376 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 TMIEQ8NEW7 156 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 STARD8Q92502 1023 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 ART4Q93070 314 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 LENG8Q96PV6 779 aaPredicted RBP12.78□□□□□ -0.36
LSM6-204ENST00000504181 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 HDAC8Q9BY41 377 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 APPL1Q9UKG1 709 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 PCDHGA3Q9Y5H0 932 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 DNHD1Q96M86 4753 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 DOCK4Q8N1I0 1966 aa12.78□□□□□ -0.36
LSM6-204ENST00000504181 IGLON5A6NGN9 336 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 PIK3R2O00459 728 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 HNRNPRO43390 633 aaKnown RBP12.77□□□□□ -0.37
LSM6-204ENST00000504181 BMP15O95972 392 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 PDGFAP04085 211 aa12.77□□□□□ -0.37
LSM6-204ENST00000504181 PRNPP04156 253 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms