RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 DCTPP1Q9H773 170 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 CDV3Q9UKY7 258 aaKnown RBP6.33□□□□□ -1.4
CLCN3-204ENST00000504131 LEMD3Q9Y2U8 911 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 TRPV2Q9Y5S1 764 aa6.33□□□□□ -1.4
CLCN3-204ENST00000504131 SAMD9LQ8IVG5 1584 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLC12A8A0AV02 714 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PLK4O00444 970 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ABCB4P21439 1286 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GRK3P35626 688 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PGM1P36871 562 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NME5P56597 212 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PFKPQ01813 784 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TAP2Q03519 686 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLC3A1Q07837 685 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GIT2Q14161 759 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 HERC3Q15034 1050 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PON3Q15166 354 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TCEA2Q15560 299 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TAB1Q15750 504 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 LSM12Q3MHD2 195 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MTX3Q5HYI7 312 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 BRMS1LQ5PSV4 323 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 CFAP77Q6ZQR2 320 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NUP54Q7Z3B4 507 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 FAM228AQ86W67 206 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NRSN1Q8IZ57 195 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 POMGNT2Q8NAT1 580 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 EDC3Q96F86 508 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 CCDC3Q9BQI4 270 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 AP5M1Q9H0R1 490 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ING2Q9H160 280 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 S100A14Q9HCY8 104 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 INTS13Q9NVM9 706 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 VPS9D1Q9Y2B5 631 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MROH1Q8NDA8 1641 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 YEATS2Q9ULM3 1422 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TTC37Q6PGP7 1564 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 LOC105371267A0A1B0GV96 52 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 A0A1W2PPH5 198 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 hCG_1807616A0A1W2PRN6 198 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 LRRC53A6NM62 1247 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 OR2AT4A6NND4 320 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 BTBD18B2RXH4 712 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TERTO14746 1132 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PGRMC2O15173 223 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 HOXC11O43248 304 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MED7O43513 233 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ADH1AP07327 375 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PPP3CBP16298 524 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 CLK2P49760 499 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NR1H2P55055 460 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 RGS8P57771 180 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 AFTPHQ6ULP2 937 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MOXD1Q6UVY6 613 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DEF8Q6ZN54 512 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DCP1BQ8IZD4 617 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 BHLHE22Q8NFJ8 381 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PSMA8Q8TAA3 256 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ADAM32Q8TC27 787 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLC2A14Q8TDB8 520 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PPWD1Q96BP3 646 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TMEM246Q9BRR3 403 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TP63Q9H3D4 680 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MAN1C1Q9NR34 630 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 C1orf112Q9NSG2 853 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PTCH2Q9Y6C5 1203 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ABCC5O15440 1437 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ATP7AQ04656 1500 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DFNA5O60443 496 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ALX3O95076 343 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 URODP06132 367 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 YES1P07947 543 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 RALAP11233 206 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 IL12AP29459 219 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PMLP29590 882 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TPMTP51580 245 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ARSDP51689 593 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PRMT2P55345 433 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MAGOHP61326 146 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 TEAD4Q15561 434 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 DALRD3Q5D0E6 543 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 GNASQ5JWF2 1037 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF813Q6ZN06 617 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NUDT18Q6ZVK8 323 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MAMDC2Q7Z304 686 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 LZTR1Q8N653 840 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 MAGOHBQ96A72 148 aaKnown RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 SLC47A1Q96FL8 570 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 APOL4Q9BPW4 351 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 FAM126AQ9BYI3 521 aaPredicted RBP6.32□□□□□ -1.4
CLCN3-204ENST00000504131 CABP5Q9NP86 173 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 NKIRAS2Q9NYR9 191 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 ZNF212Q9UDV6 495 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 PHTF1Q9UMS5 762 aa6.32□□□□□ -1.4
CLCN3-204ENST00000504131 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms