RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SH3GL2Q99962 352 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 PRDM12Q9H4Q4 367 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 RNPEPL1Q9HAU8 725 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 ADCY6O43306 1168 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 GUCY1B2O75343 617 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 TTPAP49638 278 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 PKNOX1P55347 436 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 NKX2-3Q8TAU0 364 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 MIEF2Q96C03 454 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 ZBTB10Q96DT7 871 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 RNFT2Q96EX2 444 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 RIBC2Q9H4K1 309 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 RRAGCQ9HB90 399 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 CLUHO75153 1309 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 LINC00854A0A1B0GVQ3 168 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 COX7A2P14406 83 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 GRM5P41594 1212 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 TSNQ15631 228 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 ADHFE1Q8IWW8 467 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 PTGR2Q8N8N7 351 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 IL31RAQ8NI17 732 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 PROX1Q92786 737 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 SNX6Q9UNH7 406 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 CHKAP35790 457 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 FOXR1Q6PIV2 292 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 BNIPLQ7Z465 357 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 C19orf60Q96EN9 201 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 C1QTNF7Q9BXJ2 289 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 FBXO6Q9NRD1 293 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 FZD1Q9UP38 647 aa16.72■□□□□ 0.27
PCDHA1-203ENST00000504120 TNNI3P19429 210 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ABCG1P45844 678 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 INHBEP58166 350 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MRPS22P82650 360 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 FNDC3BQ53EP0 1204 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 CAMK1DQ8IU85 385 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MRPL57Q9BQC6 102 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 HES2Q9Y543 173 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 SF3B1O75533 1304 aaKnown RBP eCLIP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 IRF6O14896 467 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 KPNA5O15131 536 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MATKP42679 507 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 SNRPD1P62314 119 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 FGD3Q5JSP0 725 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 PIWIL4Q7Z3Z4 852 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ATL1Q8WXF7 558 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 INPP4AQ96PE3 977 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 KLQ9UEF7 1012 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 NOS3P29474 1203 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 TM4SF1P30408 202 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 AIF1P55008 147 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 RAB10P61026 200 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 RPL7AP62424 266 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 IKBKEQ14164 716 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ZNF276Q8N554 614 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 AADATQ8N5Z0 425 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 PCDH20Q8N6Y1 951 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 SELENOMQ8WWX9 145 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 UBE2E3Q969T4 207 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 PPP1R16AQ96I34 528 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 BTBD7Q9P203 1132 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM25AB3EWG3 89 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM25CB3EWG5 89 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 FAM25GB3EWG6 89 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 H3BN98 237 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MSCO60682 206 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 CYP7B1O75881 506 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MED26O95402 600 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 SNRPB2P08579 225 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 GRIA4P48058 902 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 IRF8Q02556 426 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 CCDC149Q6ZUS6 474 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 CLVS1Q8IUQ0 354 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MYLPFQ96A32 169 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 KLHL25Q9H0H3 589 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ZDHHC6Q9H6R6 413 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ASB8Q9H765 288 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ATAD3AQ9NVI7 634 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ZSCAN32Q9NX65 697 aa16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 MRPL42Q9Y6G3 142 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-203ENST00000504120 ALOX15BO15296 676 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 GOT1P17174 413 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 PAICSP22234 425 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 BST1Q10588 318 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 NEDD8Q15843 81 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 FBXL19Q6PCT2 694 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 EPHX4Q8IUS5 362 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 ZCCHC7Q8N3Z6 543 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 WDR36Q8NI36 951 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 USP7Q93009 1102 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MBOAT7Q96N66 472 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 PHACTR1Q9C0D0 580 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 REEP1Q9H902 201 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MRPL17Q9NRX2 175 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 MTF2Q9Y483 593 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 AKAP12Q02952 1782 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 A0A088AWK7 358 aa16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 SLC9A3R1O14745 358 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-203ENST00000504120 COX4I1P13073 169 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms