RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 SUCOQ9UBS9 1254 aaKnown RBP15.2■□□□□ 0.02
SNF8-203ENST00000504000 SARDHQ9UL12 918 aa15.2■□□□□ 0.02
SNF8-203ENST00000504000 GNEQ9Y223 722 aaKnown RBP15.2■□□□□ 0.02
SNF8-203ENST00000504000 RUVBL2Q9Y230 463 aaKnown RBP15.2■□□□□ 0.02
SNF8-203ENST00000504000 AAR2Q9Y312 384 aaKnown RBP15.2■□□□□ 0.02
SNF8-203ENST00000504000 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 ZNF236Q9UL36 1845 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 ARHGAP10A1A4S6 786 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 GABRDO14764 452 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 ASLP04424 464 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 C8BP07358 591 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 FAM58BPP0C7Q3 252 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 PTPN1P18031 435 aaKnown RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 NFKB1P19838 968 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 NMBRP28336 390 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 NR1H2P55055 460 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 RAB10P61026 200 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 TRAP1Q12931 704 aaKnown RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 ZBTB17Q13105 803 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 MAPRE2Q15555 327 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 ZNF618Q5T7W0 954 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 LRRC8EQ6NSJ5 796 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 ANKRD13AQ8IZ07 590 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 EZH1Q92800 747 aaPredicted RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 KATNBL1Q9H079 304 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 SUDS3Q9H7L9 328 aaPredicted RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 ELP3Q9H9T3 547 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 CLIC5Q9NZA1 410 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
SNF8-203ENST00000504000 COPG1Q9Y678 874 aaKnown RBP15.19■□□□□ 0.02
SNF8-203ENST00000504000 NEMP1O14524 444 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 DLX3O60479 287 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 TMCC1O94876 653 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 PGM3O95394 542 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 AHSGP02765 367 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 DARSP14868 501 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 YBX3P16989 372 aaKnown RBP eCLIP15.18■□□□□ 0.022e-6■■□□□ 14.4
SNF8-203ENST00000504000 DAOAP59103 153 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 LILRA4P59901 499 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 COG7P83436 770 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 MYBPC1Q00872 1141 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 GALNT1Q10472 559 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 STX5Q13190 355 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 LRRC23Q53EV4 343 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 GJC2Q5T442 439 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 PKN3Q6P5Z2 889 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 OSTM1Q86WC4 334 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 PELI3Q8N2H9 469 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 NPWQ8N729 165 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 NETO2Q8NC67 525 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 RNF169Q8NCN4 708 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 NDRG1Q92597 394 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 APBA2Q99767 749 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 MRPL57Q9BQC6 102 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 UBE2OQ9C0C9 1292 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 MRPL46Q9H2W6 279 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 NXF3Q9H4D5 531 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 COPS7BQ9H9Q2 264 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 HES2Q9Y543 173 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 A0A087X1B8 175 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 SMIM35A0A1B0GVV1 85 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 BEST1O76090 585 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 ENO3P13929 434 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 ETS2P15036 469 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 CD1EP15812 388 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 ZNF26P17031 533 aaPredicted RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 LRPAP1P30533 357 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 DPP6P42658 865 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 NDUFV1P49821 464 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 TRIM25Q14258 630 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 PSMD5Q16401 504 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNF8-203ENST00000504000 NADK2Q4G0N4 442 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 RAB41Q5JT25 222 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 AGR3Q8TD06 166 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 CCDC126Q96EE4 140 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 PGLYRP2Q96PD5 576 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 PKP2Q99959 881 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 MRPL1Q9BYD6 325 aaKnown RBP15.18■□□□□ 0.02
SNF8-203ENST00000504000 UNC93B1Q9H1C4 597 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 TIMMDC1Q9NPL8 285 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 PHF24Q9UPV7 400 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 SBF1O95248 1867 aa15.18■□□□□ 0.02
SNF8-203ENST00000504000 POLR2AP24928 1970 aaKnown RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 SYNJ2BP-COX16A0A087WUM0 186 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 A0A1B0GVG6 124 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 I6L893 689 aaPredicted RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 OR6B1O95007 311 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 FAM200BP0CF97 657 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 STMN1P16949 149 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 GABRB3P28472 473 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 TXNL4AP83876 142 aaKnown RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 PTK2BQ14289 1009 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 SMAD1Q15797 465 aaKnown RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 PM20D1Q6GTS8 502 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 DCLRE1AQ6PJP8 1040 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 POTEHQ6S545 545 aa15.17■□□□□ 0.02
SNF8-203ENST00000504000 RBM44Q6ZP01 1051 aaKnown RBP15.17■□□□□ 0.02
SNF8-203ENST00000504000 METTL25Q8N6Q8 603 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms