RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 TOR4AQ9NXH8 423 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 TRPM6Q9BX84 2022 aa22.48■■□□□ 1.19
LSM6-203ENST00000503982 FAM72CH0Y354 149 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 CCP110O43303 1012 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 RAMP2O60895 175 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 LRIG2O94898 1065 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 ATP1A3P13637 1013 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 NEK3P51956 506 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 HDAC4P56524 1084 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 GEMIN4P57678 1058 aaKnown RBP22.47■■□□□ 1.19
LSM6-203ENST00000503982 NRG1Q02297 640 aaPredicted RBP22.47■■□□□ 1.19
LSM6-203ENST00000503982 FILIP1LQ4L180 1135 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 FAM72AQ5TYM5 149 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 FAM72DQ6L9T8 149 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 CCNI2Q6ZMN8 369 aaPredicted RBP22.47■■□□□ 1.19
LSM6-203ENST00000503982 IQCHQ86VS3 1027 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 FAM72BQ86X60 149 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 SAP25Q8TEE9 199 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 CALN1Q9BXU9 219 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 NDFIP2Q9NV92 336 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 TMEM248Q9NWD8 314 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 HECAQ9UBI9 543 aaPredicted RBP22.47■■□□□ 1.19
LSM6-203ENST00000503982 ZNF212Q9UDV6 495 aa22.47■■□□□ 1.19
LSM6-203ENST00000503982 SIGLEC16A6NMB1 481 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 SRRM3A6NNA2 597 aaPredicted RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 TMCO5BA8MYB1 307 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 CREB3O43889 395 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 ZMPSTE24O75844 475 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 THEGLP0DJG4 465 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 GSCP56915 257 aaPredicted RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 C1QBPQ07021 282 aaKnown RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 OVGP1Q12889 678 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 SHBQ15464 509 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 NEK5Q6P3R8 708 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 DHRS13Q6UX07 377 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 TMPRSS7Q7RTY8 843 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 SPATS2Q86XZ4 545 aaKnown RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 OR6K2Q8NGY2 324 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 CENPIQ92674 756 aaPredicted RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 ARHGEF2Q92974 986 aaKnown RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 HDAC8Q9BY41 377 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 MAGEH1Q9H213 219 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 CCDC86Q9H6F5 360 aaKnown RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 ERVMER34-1Q9H9K5 563 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 WASF2Q9Y6W5 498 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 CHD5Q8TDI0 1954 aa22.46■■□□□ 1.19
LSM6-203ENST00000503982 GOLGA4Q13439 2230 aaKnown RBP22.46■■□□□ 1.19
LSM6-203ENST00000503982 RNF103O00237 685 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 NEMP1O14524 444 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 SDC3O75056 442 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 HNRNPA2B1P22626 353 aaKnown RBP22.45■■□□□ 1.18
LSM6-203ENST00000503982 EPHB2P29323 1055 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 L1CAMP32004 1257 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 HS1BP3Q53T59 392 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 MANEALQ5VSG8 457 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 MON1BQ7L1V2 547 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 PYROXD2Q8N2H3 581 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 RETREG1Q9H6L5 497 aa22.45■■□□□ 1.18
LSM6-203ENST00000503982 COL5A1P20908 1838 aaPredicted RBP22.45■■□□□ 1.18
LSM6-203ENST00000503982 FAM149AA5PLN7 773 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 C10orf142B7Z368 130 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 KRIT1O00522 736 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 TEX33O43247 280 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 BUB1O43683 1085 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ADRB3P13945 408 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ITGB7P26010 798 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 SNRPD1P62314 119 aaKnown RBP22.44■■□□□ 1.18
LSM6-203ENST00000503982 DNAJC3Q13217 504 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ZNF284Q2VY69 593 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ARTNQ5T4W7 220 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 SEL1L3Q68CR1 1132 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ACAD10Q6JQN1 1059 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 NLRP14Q86W24 1093 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 MARCH9Q86YJ5 346 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 NTAN1Q96AB6 310 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 FEM1CQ96JP0 617 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 EPAS1Q99814 870 aa22.44■■□□□ 1.18
LSM6-203ENST00000503982 ZNF821O75541 412 aaPredicted RBP22.43■■□□□ 1.18
LSM6-203ENST00000503982 RFPL3O75679 317 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 GKP32189 559 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 RXRGP48443 463 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 ZNF143P52747 638 aaPredicted RBP22.43■■□□□ 1.18
LSM6-203ENST00000503982 CLDN2P57739 230 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 ASIC2Q16515 512 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 PARS2Q7L3T8 475 aaKnown RBP22.43■■□□□ 1.18
LSM6-203ENST00000503982 PTAR1Q7Z6K3 402 aaPredicted RBP22.43■■□□□ 1.18
LSM6-203ENST00000503982 TSPY26PQ9H489 355 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 CATSPERBQ9H7T0 1116 aa22.43■■□□□ 1.18
LSM6-203ENST00000503982 ZFR2Q9UPR6 939 aaKnown RBP22.43■■□□□ 1.18
LSM6-203ENST00000503982 RPL7AP62424 266 aaKnown RBP22.42■■□□□ 1.18
LSM6-203ENST00000503982 RPS21P63220 83 aaKnown RBP22.42■■□□□ 1.18
LSM6-203ENST00000503982 RAD51Q06609 339 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 KIAA1161Q6NSJ0 714 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 PPP1R2P3Q6NXS1 205 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 MCOLN2Q8IZK6 566 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 OR2AP1Q8NGE2 309 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 MDM1Q8TC05 714 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 CNPY3Q9BT09 278 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 FZD10Q9ULW2 581 aa22.42■■□□□ 1.18
LSM6-203ENST00000503982 ZSCAN5CA6NGD5 496 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms