RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 HDAC8Q9BY41 377 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 RAB6CQ9H0N0 254 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 MAGEH1Q9H213 219 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 HECAQ9UBI9 543 aaPredicted RBP12.2□□□□□ -0.46
MED28-203ENST00000503945 ZNF212Q9UDV6 495 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 DNAI1Q9UI46 699 aa12.2□□□□□ -0.46
MED28-203ENST00000503945 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 IGSF10Q6WRI0 2623 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FAM149AA5PLN7 773 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FAM72CH0Y354 149 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 SLC31A1O15431 190 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 ZNF821O75541 412 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 LEFTY1O75610 366 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 ZMPSTE24O75844 475 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 LRIG2O94898 1065 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 GJB6O95452 261 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 LDOC1O95751 146 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 CTSLP07711 333 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 CDK4P11802 303 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 ATP1A3P13637 1013 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 L1CAMP32004 1257 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 RXRGP48443 463 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 SERPINH1P50454 418 aaKnown RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 ZNF143P52747 638 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 HDAC4P56524 1084 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 GSCP56915 257 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 NXPH1P58417 271 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 TAS2R38P59533 333 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 CAMK2BQ13554 666 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 POLD3Q15054 466 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 CCDC157Q569K6 752 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 PIP5KL1Q5T9C9 394 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FAM72AQ5TYM5 149 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FAM72DQ6L9T8 149 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 DNAJC24Q6P3W2 148 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 C22orf39Q6P5X5 142 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 IRF2BP2Q7Z5L9 587 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FAM72BQ86X60 149 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 GATAD2AQ86YP4 633 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 PLPP6Q8IY26 295 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 GALNT15Q8N3T1 639 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 RYBPQ8N488 228 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 CHST14Q8NCH0 376 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 GRIN3AQ8TCU5 1115 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 SAP25Q8TEE9 199 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 ISG20Q96AZ6 181 aaKnown RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 TBC1D31Q96DN5 1066 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 VCPIP1Q96JH7 1222 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 BBC3Q96PG8 261 aaPredicted RBP12.19□□□□□ -0.46
MED28-203ENST00000503945 BPIFA3Q9BQP9 254 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 MAGEB5Q9BZ81 275 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 TMEM248Q9NWD8 314 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 FTSJ1Q9UET6 329 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
MED28-203ENST00000503945 MUC22E2RYF6 1773 aaPredicted RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 TEX33O43247 280 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 KDELR3O43731 214 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 RAMP2O60895 175 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 POP4O95707 220 aaKnown RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 AKT2P31751 481 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 ACVRL1P37023 503 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 AIF1P55008 147 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 SNRPD1P62314 119 aaKnown RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 ARF5P84085 180 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 BNIP3Q12983 259 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 EFHC2Q5JST6 749 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 APTXQ7Z2E3 356 aaKnown RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 NLRP14Q86W24 1093 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 HORMAD1Q86X24 394 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 ZNF354CQ86Y25 554 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 MCOLN2Q8IZK6 566 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 EID2Q8N6I1 236 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 CCDC185Q8N715 623 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 FAM174AQ8TBP5 190 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 KLK6Q92876 244 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 NTAN1Q96AB6 310 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 ARRDC3Q96B67 414 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 HSD3B7Q9H2F3 369 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 DONSONQ9NYP3 566 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 TMEM63CQ9P1W3 806 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 DKK4Q9UBT3 224 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 FCF1Q9Y324 198 aaKnown RBP12.18□□□□□ -0.46
MED28-203ENST00000503945 HS3ST3A1Q9Y663 406 aa12.18□□□□□ -0.46
MED28-203ENST00000503945 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 MYLKQ15746 1914 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 ZSCAN5CA6NGD5 496 aaPredicted RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 TMCO5BA8MYB1 307 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 BUB1O43683 1085 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 CREB3O43889 395 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 C1SP09871 688 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 EPHB2P29323 1055 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 ZNF165P49910 485 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 CCNHP51946 323 aaPredicted RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 NEK3P51956 506 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms