RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 TBR1Q16650 682 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 MANEAQ5SRI9 462 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 FAXCQ5TGI0 409 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 TTC39BQ5VTQ0 682 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 KYAT3Q6YP21 454 aaKnown RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 RAB11FIP2Q7L804 512 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 ZFAND4Q86XD8 727 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 ARHGEF19Q8IW93 802 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 TMIEQ8NEW7 156 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 GRAMD1AQ96CP6 724 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 FEM1CQ96JP0 617 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 PPP1R9BQ96SB3 815 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 PSMB7Q99436 277 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 POPDC2Q9HBU9 364 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 NCKIPSDQ9NZQ3 722 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 APOBEC3BQ9UH17 382 aaKnown RBP9.32□□□□□ -0.92
CCDC171-209ENST00000498725 USP25Q9UHP3 1055 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 VPS51Q9UID3 782 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 SALL4Q9UJQ4 1053 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 PADI4Q9UM07 663 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 DOLKQ9UPQ8 538 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 COQ4Q9Y3A0 265 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 OR51B4Q9Y5P0 310 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 CSNK1G3Q9Y6M4 447 aa9.32□□□□□ -0.92
CCDC171-209ENST00000498725 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 IGLON5A6NGN9 336 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 NEMP1O14524 444 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SART1O43290 800 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 PPFIA2O75334 1257 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 AFPP02771 609 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 MYL1P05976 194 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CELA2BP08218 269 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 JMJD7P0C870 316 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ADRB3P13945 408 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ITIH1P19827 911 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CCR1P32246 355 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 GPD2P43304 727 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ACADSBP45954 432 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 RABIFP47224 123 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 NEK3P51956 506 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 NDUFA8P51970 172 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 THOP1P52888 689 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 MAPK10P53779 464 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 YWHAZP63104 245 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 RPS21P63220 83 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CCL7P80098 99 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CDK17Q00537 523 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 UBAP2LQ14157 1087 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SKIDA1Q1XH10 827 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ESRP1Q6NXG1 681 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 C22orf39Q6P5X5 142 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 DPY19L3Q6ZPD9 716 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 PHACTR4Q8IZ21 702 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 DEFB106AQ8N104 65 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SDR16C5Q8N3Y7 309 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 JPH3Q8WXH2 748 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CCDC74AQ96AQ1 378 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 PPP1R16AQ96I34 528 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 GFM1Q96RP9 751 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 TSG101Q99816 390 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 BOCQ9BWV1 1114 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CPEB1Q9BZB8 566 aaKnown RBP9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ZDHHC6Q9H6R6 413 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SPASTQ9UBP0 616 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SEPT3Q9UH03 358 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 GGT7Q9UJ14 662 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 RABGEF1Q9UJ41 708 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 RCOR1Q9UKL0 485 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 CFAP45Q9UL16 551 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 ITM2BQ9Y287 266 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 SNX10Q9Y5X0 201 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 HS3ST4Q9Y661 456 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 LRP4O75096 1905 aa9.31□□□□□ -0.92
CCDC171-209ENST00000498725 PTPN13Q12923 2485 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PRAMEF33A0A0G2JMD5 474 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 FAM170AA1A519 330 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 TRIM49BA6NDI0 452 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 YY2O15391 372 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PRAMEF10O60809 474 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PAGE1O75459 146 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 CLDN11O75508 207 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 IGLV3-25P01717 112 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 NTRK1P04629 796 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 RPLP0P05388 317 aaKnown RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 SLC2A3P11169 496 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 TSHRP16473 764 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 WT1P19544 449 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-209ENST00000498725 CMA1P23946 247 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 GKP32189 559 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 NOS2P35228 1153 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PRCPP42785 496 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 FMO5P49326 533 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 INHBCP55103 352 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 PKP1Q13835 747 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 CLCA4Q14CN2 919 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 IGFBP7Q16270 282 aa9.3□□□□□ -0.92
CCDC171-209ENST00000498725 ALFQ53S48 1182 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms