RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ZBTB20Q9HC78 741 aaPredicted RBP4.84□□□□□ -1.63
CSTF1-207ENST00000498689 C6orf50Q9HD87 102 aa4.84□□□□□ -1.63
CSTF1-207ENST00000498689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.84□□□□□ -1.63
CSTF1-207ENST00000498689 DNAJB12Q9NXW2 375 aaKnown RBP4.84□□□□□ -1.63
CSTF1-207ENST00000498689 DDX43Q9NXZ2 648 aaKnown RBP4.84□□□□□ -1.63
CSTF1-207ENST00000498689 DSEQ9UL01 958 aa4.84□□□□□ -1.63
CSTF1-207ENST00000498689 PLA2G4CQ9UP65 541 aa4.84□□□□□ -1.63
CSTF1-207ENST00000498689 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
CSTF1-207ENST00000498689 A0A0U1RQS6 177 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 A0A1W2PQU0 124 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 TTC34A8MYJ7 566 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PIK3R2O00459 728 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 GNB5O14775 395 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 RAD51BO15315 384 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 DKC1O60832 514 aaKnown RBP eCLIP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SHOX2O60902 331 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 JRKO75564 520 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SLCO2B1O94956 709 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 REC8O95072 547 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 IGFBP2P18065 325 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 CHRNA4P43681 627 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PPP3CCP48454 512 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 GNAQP50148 359 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 OR1D5P58170 312 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PSMC1P62191 440 aaKnown RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 B4GALNT1Q00973 533 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 NRG1Q02297 640 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 CNTN1Q12860 1018 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 EPHA7Q15375 998 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 LONRF1Q17RB8 773 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ZNF284Q2VY69 593 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 AGBL4Q5VU57 503 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 NCAPH2Q6IBW4 605 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 JADE1Q6IE81 842 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 MPZL3Q6UWV2 235 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SLCO4C1Q6ZQN7 724 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PIM3Q86V86 326 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SLC47A2Q86VL8 602 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SYT2Q8N9I0 419 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ATP11CQ8NB49 1132 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SCAMP5Q8TAC9 235 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 WFDC5Q8TCV5 224 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PANK1Q8TE04 598 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 FAR1Q8WVX9 515 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 MYLPFQ96A32 169 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 FAM131CQ96AQ9 280 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PCMTD1Q96MG8 357 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 TRAPPC9Q96Q05 1148 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SMAD5Q99717 465 aaKnown RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SLX1AQ9BQ83 275 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ACBD6Q9BR61 282 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ZNF559Q9BR84 538 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ADAM19Q9H013 955 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PDE7BQ9NP56 450 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 AKAP7Q9P0M2 348 aaPredicted RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 APOBEC3BQ9UH17 382 aaKnown RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SUN2Q9UH99 717 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ADGRE2Q9UHX3 823 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 APPL1Q9UKG1 709 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 NUDT5Q9UKK9 219 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 L1RE1Q9UN81 338 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 G3BP2Q9UN86 482 aaKnown RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 ZFR2Q9UPR6 939 aaKnown RBP4.83□□□□□ -1.64
CSTF1-207ENST00000498689 HERC2O95714 4834 aa4.83□□□□□ -1.64
CSTF1-207ENST00000498689 PHF3Q92576 2039 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 SACSQ9NZJ4 4579 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 FRMD3A2A2Y4 597 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 TRIM64A6NGJ6 449 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 TRIM64BA6NI03 449 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 A6NNZ2 444 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 TIMM44O43615 452 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 BNIP3LO60238 219 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 RNASEH1O60930 286 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 IL1BP01584 269 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 DLDP09622 509 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 C5AR1P21730 350 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 HNRNPA2B1P22626 353 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 LMO2P25791 158 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 CA5AP35218 305 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 NUDT1P36639 197 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 SCNN1AP37088 669 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 NAMPTP43490 491 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 PDE1CQ14123 709 aaPredicted RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 PCOLCEQ15113 449 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 DEFB113Q30KQ7 82 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 HNRNPA1L2Q32P51 320 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 MIDNQ504T8 468 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 C10orf62Q5T681 223 aaPredicted RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 NKAIN2Q5VXU1 208 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 TDRD10Q5VZ19 366 aaKnown RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 SEL1L3Q68CR1 1132 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 MBLAC2Q68D91 279 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 FAAH2Q6GMR7 532 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 FAM171BQ6P995 826 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 APBB1IPQ7Z5R6 666 aaPredicted RBP4.82□□□□□ -1.64
CSTF1-207ENST00000498689 CCDC83Q8IWF9 413 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 PHACTR4Q8IZ21 702 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 AGBL5Q8NDL9 886 aa4.82□□□□□ -1.64
CSTF1-207ENST00000498689 ADAMTS18Q8TE60 1221 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms