RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 NEK3P51956 506 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 MTA1Q13330 715 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 DEFB133Q30KQ1 61 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 INO80CQ6PI98 192 aaPredicted RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 TFAP2DQ7Z6R9 452 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 PARGQ86W56 976 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 DCP2Q8IU60 420 aaKnown RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 C1orf131Q8NDD1 294 aaKnown RBP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 FAM174AQ8TBP5 190 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 NELFBQ8WX92 580 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 PPP1R16AQ96I34 528 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 CTNND2Q9UQB3 1225 aa15.01□□□□□ -0.01
TRAF4-212ENST00000498540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.01□□□□□ -0.01
TRAF4-212ENST00000498540 NAV2Q8IVL1 2488 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 CDRT15L2A8MXV6 281 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 PPP1R3GB7ZBB8 358 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 H3BM21 787 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 SPINT1O43278 529 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 AQP9O43315 295 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 ADRB3P13945 408 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 USP8P40818 1118 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 CLCN6P51797 869 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 RPS21P63220 83 aaKnown RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 APBA1Q02410 837 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 PDE1CQ14123 709 aaPredicted RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 PERM1Q5SV97 790 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 KIAA1161Q6NSJ0 714 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 FOXR1Q6PIV2 292 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 RBM44Q6ZP01 1051 aaKnown RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 C11orf57Q6ZUT1 292 aaPredicted RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 SETD3Q86TU7 594 aaPredicted RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 OR7D4Q8NG98 312 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 MED8Q96G25 268 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 KLF6Q99612 283 aaPredicted RBP15□□□□□ -0.01
TRAF4-212ENST00000498540 TKTL2Q9H0I9 626 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 CLMPQ9H6B4 373 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 TMPRSS4Q9NRS4 437 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 ARHGEF38Q9NXL2 777 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 MPP6Q9NZW5 540 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 PCDHGA8Q9Y5G5 932 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 FADS3Q9Y5Q0 445 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 CSNK1G3Q9Y6M4 447 aa15□□□□□ -0.01
TRAF4-212ENST00000498540 EME2A4GXA9 379 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 JUNDP17535 347 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 ITGB7P26010 798 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 NOS2P35228 1153 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 RECQLP46063 649 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 RABIFP47224 123 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 CXCR3P49682 368 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 PDX1P52945 283 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 MARSP56192 900 aaKnown RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 STX17P56962 302 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 EIF2B5Q13144 721 aaKnown RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 ARHGAP44Q17R89 818 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 PTPN20Q4JDL3 420 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 ARTNQ5T4W7 220 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 PARS2Q7L3T8 475 aaKnown RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 ENOSF1Q7L5Y1 443 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 SLC26A9Q7LBE3 791 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 RBFAQ8N0V3 343 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 LMX1AQ8TE12 382 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 FEM1CQ96JP0 617 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 NPY6RQ99463 290 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 CRACR2AQ9BSW2 395 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 TCEAL2Q9H3H9 227 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-212ENST00000498540 NCKIPSDQ9NZQ3 722 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 SALL4Q9UJQ4 1053 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 PCDHGC3Q9UN70 934 aa14.99□□□□□ -0.01
TRAF4-212ENST00000498540 DRGXA6NNA5 263 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 MUSKO15146 869 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 SLC28A2O43868 658 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 ZMPSTE24O75844 475 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 L1CAMP32004 1257 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 PPP1R2P41236 205 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 SERPINH1P50454 418 aaKnown RBP14.98□□□□□ -0.01
TRAF4-212ENST00000498540 SLC6A3Q01959 620 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
TRAF4-212ENST00000498540 CLN3Q13286 438 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 NR0B2Q15466 257 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 BRMS1LQ5PSV4 323 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 FOXR2Q6PJQ5 311 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 CLEC14AQ86T13 490 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 GRAMD1AQ96CP6 724 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 CCDC97Q96F63 343 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-212ENST00000498540 IL12RB2Q99665 862 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 BOCQ9BWV1 1114 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 WDCPQ9H6R7 721 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 ZNF212Q9UDV6 495 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 IPO11Q9UI26 975 aaKnown RBP14.98□□□□□ -0.01
TRAF4-212ENST00000498540 GGT7Q9UJ14 662 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 PNMA8BQ9ULN7 279 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-212ENST00000498540 ITM2BQ9Y287 266 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 ACTL7AQ9Y615 435 aa14.98□□□□□ -0.01
TRAF4-212ENST00000498540 IGLV3-10A0A075B6K4 115 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 BICDL2A1A5D9 508 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 GOLGA6L4A6NEF3 574 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 IGLON5A6NGN9 336 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 FPGTO14772 594 aa14.97□□□□□ -0.01
TRAF4-212ENST00000498540 TPP1O14773 563 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms