RNA–Protein interactions for RNA: ENST00000498532.5

HDAC11-220, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-220ENST00000498532 HEPHQ9BQS7 1158 aa17.71■□□□□ 0.43
HDAC11-220ENST00000498532 RAB6CQ9H0N0 254 aa17.71■□□□□ 0.43
HDAC11-220ENST00000498532 ARID1BQ8NFD5 2236 aaPredicted RBP17.71■□□□□ 0.43
HDAC11-220ENST00000498532 IGSF10Q6WRI0 2623 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 LOC400499M0QZD8 3231 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 KNTC1P50748 2209 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 RHOQP17081 205 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 ACVRL1P37023 503 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 MAPKAPK2P49137 400 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 GEMIN4P57678 1058 aaKnown RBP17.7■□□□□ 0.42
HDAC11-220ENST00000498532 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
HDAC11-220ENST00000498532 TMEM259Q4ZIN3 620 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 CARD16Q5EG05 197 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 MANEALQ5VSG8 457 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 KIAA1161Q6NSJ0 714 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 STRADAQ7RTN6 431 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 ANKRD20A12PQ8NF67 263 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 TM6SF2Q9BZW4 377 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 ZDHHC6Q9H6R6 413 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 KLHL11Q9NVR0 708 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 ZFR2Q9UPR6 939 aaKnown RBP17.7■□□□□ 0.42
HDAC11-220ENST00000498532 SIK3Q9Y2K2 1263 aa17.7■□□□□ 0.42
HDAC11-220ENST00000498532 CXorf51AA0A1B0GTR3 108 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 A6NNZ2 444 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 GJB6O95452 261 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 KRT3P12035 628 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 L1CAMP32004 1257 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 ANP32AP39687 249 aaKnown RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 CLDN2P57739 230 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 RPS21P63220 83 aaKnown RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 POLD3Q15054 466 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 SYCP1Q15431 976 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 PROX2Q3B8N5 592 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 GCNT7Q6ZNI0 430 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 PARS2Q7L3T8 475 aaKnown RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 PTAR1Q7Z6K3 402 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 RYBPQ8N488 228 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 NEK11Q8NG66 645 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 OR6K2Q8NGY2 324 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 FAM172AQ8WUF8 416 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 HNRNPLLQ8WVV9 542 aaKnown RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 ISG20Q96AZ6 181 aaKnown RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 TBC1D31Q96DN5 1066 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 OSBPL2Q9H1P3 480 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 RETREG1Q9H6L5 497 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 SCUBE2Q9NQ36 999 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 NDFIP2Q9NV92 336 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 TMEM248Q9NWD8 314 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 ADAM22Q9P0K1 906 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 HECAQ9UBI9 543 aaPredicted RBP17.69■□□□□ 0.42
HDAC11-220ENST00000498532 HPCAL4Q9UM19 191 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 NEU3Q9UQ49 428 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 ACTL7AQ9Y615 435 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 CHD5Q8TDI0 1954 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 TRPM6Q9BX84 2022 aa17.69■□□□□ 0.42
HDAC11-220ENST00000498532 SMG1Q96Q15 3661 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 URB1O60287 2271 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FAM72CH0Y354 149 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 TRIM38O00635 465 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FFAR2O15552 330 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 SIGLEC6O43699 453 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 RAMP2O60895 175 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 LRIG2O94898 1065 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 CALB1P05937 261 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 UNGP13051 313 aaPredicted RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 HOXB3P14651 431 aaPredicted RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 DGKAP23743 735 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 COPB1P53618 953 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 HDAC4P56524 1084 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 TARDBPQ13148 414 aaKnown RBP eCLIP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 ZNF211Q13398 564 aaPredicted RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FAM72AQ5TYM5 149 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FAM72DQ6L9T8 149 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 RBM43Q6ZSC3 357 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 ABI3BPQ7Z7G0 1075 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 PDZD3Q86UT5 571 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FAM72BQ86X60 149 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 SLC22A18ASQ8N1D0 253 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 SLC25A45Q8N413 288 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 CCDC185Q8N715 623 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 OR4C6Q8NH72 309 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FAM174AQ8TBP5 190 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 CENPIQ92674 756 aaPredicted RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 ARHGEF2Q92974 986 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 SELENOOQ9BVL4 669 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 MAGEH1Q9H213 219 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
HDAC11-220ENST00000498532 FADS3Q9Y5Q0 445 aa17.68■□□□□ 0.42
HDAC11-220ENST00000498532 LGALS16A8MUM7 142 aa17.67■□□□□ 0.42
HDAC11-220ENST00000498532 KRIT1O00522 736 aa17.67■□□□□ 0.42
HDAC11-220ENST00000498532 AP1G1O43747 822 aa17.67■□□□□ 0.42
HDAC11-220ENST00000498532 CD160O95971 181 aa17.67■□□□□ 0.42
HDAC11-220ENST00000498532 PLEKP08567 350 aaPredicted RBP17.67■□□□□ 0.42
HDAC11-220ENST00000498532 GPD1P21695 349 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms